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While debugging another issue unrelated to HDF5, I think I tripped up a deadlock condition. In my test, it seems the MPI_File_get_size call returns an error here:
While debugging another issue unrelated to HDF5, I think I tripped up a deadlock condition. In my test, it seems the MPI_File_get_size call returns an error here:
hdf5/src/H5FDmpio.c
Lines 828 to 832 in c56464f
That causes rank 0 to jump to the bottom of the function to close the file, which is a collective:
hdf5/src/H5FDmpio.c
Lines 858 to 861 in c56464f
While other ranks are stuck in a different collective here:
hdf5/src/H5FDmpio.c
Line 835 in c56464f
Also, I noticed that there may be other patterns like this while grepping the file to look for this location, like maybe:
hdf5/src/H5FDmpio.c
Lines 1223 to 1229 in c56464f
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