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healthcareai 2.4.0 Error: Can't find columns NA, NA in .data. #1289

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genghiskhanofnz opened this issue Apr 23, 2020 · 0 comments
Open

healthcareai 2.4.0 Error: Can't find columns NA, NA in .data. #1289

genghiskhanofnz opened this issue Apr 23, 2020 · 0 comments

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@genghiskhanofnz
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Hi there
Please advise how to fix this error.
Thanks.

The problem: When run machine_learn() >>

quick_models <-

  • machine_learn(pima_diabetes, outcome = diabetes, patient_id)
    Training new data prep recipe...

Error: Can't find columns NA, NA in .data.
Run rlang::last_error() to see where the error occurred.
In addition: Warning message:
All elements of ... must be named.
Did you want data = c(type, role, source)?

devtools::session_info()

  • Session info ---------------------------------------------------------------------------------------------------------
    setting value
    version R version 3.6.3 (2020-02-29)
    os Windows 10 x64
    system x86_64, mingw32
    ui RStudio
    language (EN)
    collate English_Australia.1252
    ctype English_Australia.1252
    tz Australia/Sydney
    date 2020-04-23

  • Packages -------------------------------------------------------------------------------------------------------------
    package * version date lib source
    assertthat 0.2.1 2019-03-21 [1] CRAN (R 3.6.3)
    backports 1.1.2 2017-12-13 [1] CRAN (R 3.5.0)
    base64enc 0.1-3 2015-07-28 [1] CRAN (R 3.5.0)
    bitops 1.0-6 2013-08-17 [1] CRAN (R 3.5.0)
    callr 3.0.0 2018-08-24 [1] CRAN (R 3.5.1)
    caret 6.0-84 2019-04-27 [1] CRAN (R 3.6.1)
    caTools 1.17.1.1 2018-07-20 [1] CRAN (R 3.5.1)
    class 7.3-15 2019-01-01 [2] CRAN (R 3.6.3)
    cli 2.0.2 2020-02-28 [1] CRAN (R 3.6.3)
    codetools 0.2-16 2018-12-24 [2] CRAN (R 3.6.3)
    colorspace 1.3-2 2016-12-14 [1] CRAN (R 3.5.1)
    cowplot 1.0.0 2019-07-11 [1] CRAN (R 3.6.3)
    crayon 1.3.4 2017-09-16 [1] CRAN (R 3.5.1)
    data.table 1.12.8 2019-12-09 [1] CRAN (R 3.6.2)
    desc 1.2.0 2018-05-01 [1] CRAN (R 3.5.1)
    devtools 2.0.0 2018-10-19 [1] CRAN (R 3.5.1)
    digest 0.6.25 2020-02-23 [1] CRAN (R 3.6.3)
    dplyr 0.8.5 2020-03-07 [1] CRAN (R 3.6.3)
    e1071 1.7-0 2018-07-28 [1] CRAN (R 3.5.1)
    evaluate 0.13 2019-02-12 [1] CRAN (R 3.5.3)
    fansi 0.4.1 2020-01-08 [1] CRAN (R 3.6.3)
    foreach 1.4.4 2017-12-12 [1] CRAN (R 3.5.1)
    fs 1.2.6 2018-08-23 [1] CRAN (R 3.5.1)
    gdata 2.18.0 2017-06-06 [1] CRAN (R 3.5.1)
    generics 0.0.2 2018-11-29 [1] CRAN (R 3.6.1)
    ggplot2 3.3.0 2020-03-05 [1] CRAN (R 3.6.3)
    glmnet 2.0-16 2018-04-02 [1] CRAN (R 3.5.1)
    glue 1.3.2 2020-03-12 [1] CRAN (R 3.6.3)
    gower 0.1.2 2017-02-23 [1] CRAN (R 3.5.1)
    gplots 3.0.1 2016-03-30 [1] CRAN (R 3.5.1)
    gtable 0.2.0 2016-02-26 [1] CRAN (R 3.5.1)
    gtools 3.8.1 2018-06-26 [1] CRAN (R 3.5.0)
    healthcareai * 2.4.0 2020-02-28 [1] CRAN (R 3.6.3)
    htmltools 0.3.6 2017-04-28 [1] CRAN (R 3.5.1)
    ipred 0.9-7 2018-08-14 [1] CRAN (R 3.5.1)
    iterators 1.0.10 2018-07-13 [1] CRAN (R 3.5.1)
    KernSmooth 2.23-16 2019-10-15 [2] CRAN (R 3.6.3)
    knitr 1.28 2020-02-06 [1] CRAN (R 3.6.3)
    lattice 0.20-38 2018-11-04 [2] CRAN (R 3.6.3)
    lava 1.6.3 2018-08-10 [1] CRAN (R 3.5.1)
    lifecycle 0.1.0 2019-08-01 [1] CRAN (R 3.6.2)
    lubridate 1.7.4 2018-04-11 [1] CRAN (R 3.5.1)
    magrittr 1.5 2014-11-22 [1] CRAN (R 3.5.1)
    MASS 7.3-51.5 2019-12-20 [2] CRAN (R 3.6.3)
    Matrix 1.2-18 2019-11-27 [2] CRAN (R 3.6.3)
    memoise 1.1.0 2017-04-21 [1] CRAN (R 3.5.1)
    MLmetrics 1.1.1 2016-05-13 [1] CRAN (R 3.5.1)
    ModelMetrics 1.2.0 2018-08-10 [1] CRAN (R 3.5.1)
    munsell 0.5.0 2018-06-12 [1] CRAN (R 3.5.1)
    nlme 3.1-144 2020-02-06 [2] CRAN (R 3.6.3)
    nnet 7.3-12 2016-02-02 [2] CRAN (R 3.6.3)
    pillar 1.4.3 2019-12-20 [1] CRAN (R 3.6.2)
    pkgbuild 1.0.2 2018-10-16 [1] CRAN (R 3.5.1)
    pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 3.6.3)
    pkgload 1.0.1 2018-10-11 [1] CRAN (R 3.5.1)
    plyr 1.8.4 2016-06-08 [1] CRAN (R 3.5.1)
    prettyunits 1.0.2 2015-07-13 [1] CRAN (R 3.5.1)
    processx 3.2.0 2018-08-16 [1] CRAN (R 3.5.1)
    prodlim 2018.04.18 2018-04-18 [1] CRAN (R 3.5.1)
    ps 1.2.0 2018-10-16 [1] CRAN (R 3.5.1)
    purrr 0.3.3 2019-10-18 [1] CRAN (R 3.6.3)
    R6 2.3.0 2018-10-04 [1] CRAN (R 3.5.1)
    ranger 0.10.1 2018-06-04 [1] CRAN (R 3.5.1)
    Rcpp 1.0.4 2020-03-17 [1] CRAN (R 3.6.3)
    recipes 0.1.6 2019-07-02 [1] CRAN (R 3.6.1)
    remotes 2.1.1 2020-02-15 [1] CRAN (R 3.6.3)
    reshape2 1.4.3 2017-12-11 [1] CRAN (R 3.5.1)
    rlang 0.4.5 2020-03-01 [1] CRAN (R 3.6.3)
    rmarkdown 2.1 2020-01-20 [1] CRAN (R 3.6.2)
    ROCR 1.0-7 2015-03-26 [1] CRAN (R 3.5.1)
    rpart 4.1-15 2019-04-12 [2] CRAN (R 3.6.3)
    rprojroot 1.3-2 2018-01-03 [1] CRAN (R 3.5.1)
    rstudioapi 0.8 2018-10-02 [1] CRAN (R 3.5.1)
    scales 1.1.0 2019-11-18 [1] CRAN (R 3.6.2)
    sessioninfo 1.1.0 2018-09-25 [1] CRAN (R 3.5.1)
    stringi 1.2.4 2018-07-20 [1] CRAN (R 3.5.1)
    stringr 1.3.1 2018-05-10 [1] CRAN (R 3.5.1)
    survival 3.1-8 2019-12-03 [2] CRAN (R 3.6.3)
    testthat 2.3.2 2020-03-02 [1] CRAN (R 3.6.3)
    tibble 2.1.3 2019-06-06 [1] CRAN (R 3.6.2)
    tidyr 1.0.2 2020-01-24 [1] CRAN (R 3.6.2)
    tidyselect 0.2.5 2018-10-11 [1] CRAN (R 3.5.1)
    timeDate 3043.102 2018-02-21 [1] CRAN (R 3.5.1)
    tinytex 0.13 2019-05-14 [1] CRAN (R 3.5.3)
    usethis 1.4.0 2018-08-14 [1] CRAN (R 3.5.1)
    utf8 1.1.4 2018-05-24 [1] CRAN (R 3.5.1)
    vctrs 0.2.4 2020-03-10 [1] CRAN (R 3.6.3)
    withr 2.1.2 2018-03-15 [1] CRAN (R 3.5.1)
    xfun 0.7 2019-05-14 [1] CRAN (R 3.5.3)
    xgboost 0.71.2 2018-06-09 [1] CRAN (R 3.5.1)
    yaml 2.2.0 2018-07-25 [1] CRAN (R 3.5.1)

[1] C:/Users/mazzrz/Documents/R/win-library/3.6
[2] C:/Users/mazzrz/Documents/R/R-3.6.3/library

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