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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(analyzeHistone)
export(blib_seamlessIDswap)
export(litReview)
export(litRicher)
export(mgf_extractMS2scan)
export(mgf_extractScan)
export(mgf_searchDiagIon)
export(misc_checkFileNames)
export(misc_clearLabeling)
export(misc_createFolder)
export(misc_extractMetaData)
export(misc_parseSpectrumtitle)
export(misc_useCustomNames)
export(normalizeNplot)
export(plot_H3vsH33)
export(plot_annotateSpectrum)
export(plot_intDensity)
export(plot_jitterbarIntvsPTM)
export(plot_mirrorSpectra)
export(plot_schdueldPRMranges)
export(plot_scheduledPRM)
export(ptm_Uniprot)
export(ptm_beautify)
export(ptm_flagDupes)
export(ptm_labelingAssessment)
export(ptm_toProForma)
export(quant_coefVariation)
export(quant_manIsoCorreciton)
export(quant_me1LabelingPlot)
export(quant_relIntensity)
export(seq_AAcountplot)
export(seq_getHistPeptide)
export(seq_spreadIntoSheets)
import(ggplot2)
importFrom(cli,cli_abort)
importFrom(cli,cli_alert_danger)
importFrom(cli,cli_alert_info)
importFrom(cli,cli_alert_success)
importFrom(cli,cli_alert_warning)
importFrom(cli,cli_h1)
importFrom(cli,cli_h2)
importFrom(cli,cli_h3)
importFrom(cli,cli_inform)
importFrom(cli,cli_progress_bar)
importFrom(cli,cli_progress_done)
importFrom(cli,cli_progress_update)
importFrom(cli,col_red)
importFrom(dplyr,across)
importFrom(dplyr,add_count)
importFrom(dplyr,all_of)
importFrom(dplyr,any_of)
importFrom(dplyr,arrange)
importFrom(dplyr,between)
importFrom(dplyr,bind_cols)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,collect)
importFrom(dplyr,cur_column)
importFrom(dplyr,desc)
importFrom(dplyr,distinct)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,group_keys)
importFrom(dplyr,group_split)
importFrom(dplyr,if_else)
importFrom(dplyr,inner_join)
importFrom(dplyr,join_by)
importFrom(dplyr,left_join)
importFrom(dplyr,lst)
importFrom(dplyr,matches)
importFrom(dplyr,mutate)
importFrom(dplyr,n_distinct)
importFrom(dplyr,near)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,rowwise)
importFrom(dplyr,select)
importFrom(dplyr,starts_with)
importFrom(dplyr,summarise)
importFrom(dplyr,summarise_all)
importFrom(dplyr,summarize)
importFrom(dplyr,tbl)
importFrom(dplyr,ungroup)
importFrom(dplyr,where)
importFrom(ggridges,geom_density_ridges_gradient)
importFrom(ggtext,element_markdown)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grid,unit)
importFrom(openxlsx,addWorksheet)
importFrom(openxlsx,createWorkbook)
importFrom(openxlsx,getSheetNames)
importFrom(openxlsx,read.xlsx)
importFrom(openxlsx,saveWorkbook)
importFrom(openxlsx,write.xlsx)
importFrom(openxlsx,writeData)
importFrom(purrr,map)
importFrom(purrr,map2)
importFrom(purrr,map2_chr)
importFrom(purrr,map_chr)
importFrom(purrr,map_dbl)
importFrom(purrr,map_dfr)
importFrom(purrr,pluck)
importFrom(purrr,pmap)
importFrom(purrr,walk)
importFrom(purrr,walk2)
importFrom(readr,parse_number)
importFrom(readxl,read_excel)
importFrom(rlang,":=")
importFrom(rlang,as_name)
importFrom(rlang,check_installed)
importFrom(rlang,enexpr)
importFrom(rlang,enquo)
importFrom(rlang,ensym)
importFrom(rlang,eval_tidy)
importFrom(rlang,is_empty)
importFrom(rlang,is_missing)
importFrom(rlang,quo_name)
importFrom(rlang,set_names)
importFrom(rlang,sym)
importFrom(scales,breaks_pretty)
importFrom(scales,label_percent)
importFrom(scales,percent_format)
importFrom(stats,median)
importFrom(stats,qt)
importFrom(stats,reorder)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stringr,str_c)
importFrom(stringr,str_count)
importFrom(stringr,str_detect)
importFrom(stringr,str_extract)
importFrom(stringr,str_extract_all)
importFrom(stringr,str_flatten)
importFrom(stringr,str_glue)
importFrom(stringr,str_match_all)
importFrom(stringr,str_remove)
importFrom(stringr,str_remove_all)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_split_1)
importFrom(stringr,str_split_i)
importFrom(stringr,str_to_lower)
importFrom(stringr,str_trim)
importFrom(stringr,str_unique)
importFrom(stringr,str_wrap)
importFrom(tibble,as_tibble)
importFrom(tibble,deframe)
importFrom(tibble,tibble)
importFrom(tidyr,crossing)
importFrom(tidyr,drop_na)
importFrom(tidyr,nest)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,separate_wider_regex)
importFrom(tidyr,tibble)
importFrom(tidyr,unnest)
importFrom(tidyr,unnest_longer)
importFrom(tidyr,unnest_wider)
importFrom(utils,install.packages)
importFrom(utils,read.table)
importFrom(utils,write.csv)
importFrom(writexl,write_xlsx)