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usegalaxy.fr covid workflow #7
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Yes @lecorguille , I suppose that it makes sense to do this to integrate information from this repo in the software infrastructure of usegalaxy.fr, which is indeed my view - to be discussed as necessary.
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I'm not saying that you should give up with this repo. But now, that you are mention it ... :P
Finally, the choose is either split usegalaxy.fr dev or just have the same domain url |
I am not sure if this issue is a big one or even if it is one. More important is to structure a plan for covid19 analyses by the usegalaxy.fr galaxy infrastructure. We also need a chat channel and a trello board-like thing, with the possibility to invite galaxy community members for help or advices. |
Hop, GitLab provide a Trello-Board like experience: https://gitlab.com/groups/ifb-elixirfr/usegalaxy-fr/-/boards We can also create a dedicate subgroup covid19 in https://gitlab.com/groups/ifb-elixirfr/usegalaxy-fr to have a place where we can put meetings Readme, CR, boards, issues, ... without real codes. |
@lecorguille there is already a covid group in this github organisation, we can create a dozen more if needed. The trello board experience also exists (https://github.com/IFB-ElixirFr/EMERGEN-workflows/projects) as well as all items you mentioned. Let's meet, lets's talk, let's count us. These are the highest priorities. Can you help me to focus a max of people on this repo, while avoiding cleaving on minor points ? We can move everywhere else after, if it is needed and/or justified. |
We already have some published workflow based on the https://covid19.galaxyproject.org/ : https://usegalaxy.fr/workflows/list_published
I don't know if there are versionned but we should update them if needed and re-publish with another account.
We can set a gitlab repo to publish workflow through CI with the up-to-date version using bioblend?
It will be useful even if we create a dedicated separate Galaxy instance
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