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IGVF-2236-fix-dbxrefs (#1246)
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2 files changed

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src/igvfd/schemas/human_donor.json

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@@ -171,17 +171,17 @@
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}
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},
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"dbxrefs": {
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"comment": "Supported external resources include: GEO, ENCODE, ISGR.",
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"comment": "Supported external resources include: GEO, ENCODE, IGSR.",
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"items": {
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"title": "External identifier",
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"description": "Identifier from an external resource that may have 1-to-1 or 1-to-many relationships with IGVF file objects.",
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"type": "string",
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"minItems": 1,
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"pattern": "(^GEO:SAMN\\d+$)|(^ENCODE:ENCDO\\d{3}[A-Z]{3}$)|^(ISGR):.+$"
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"pattern": "(^GEO:SAMN\\d+$)|(^ENCODE:ENCDO\\d{3}[A-Z]{3}$)|^(IGSR):.+$"
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},
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"submissionExample": {
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"appscript": "[\"ISGR:NA12978\"]",
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"igvf_utils": "ISGR:NA12978"
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"appscript": "[\"IGSR:NA12978\"]",
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"igvf_utils": "IGSR:NA12978"
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}
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}
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},

src/igvfd/tests/data/inserts/human_donor.json

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@@ -145,7 +145,7 @@
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"Puerto Rican"
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],
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"dbxrefs": [
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"ISGR:NA12978"
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"IGSR:NA12978"
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],
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"sex": "female",
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"taxa": "Homo sapiens",

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