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Make use of array jobs on cluster #17

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alexdewar opened this issue Sep 28, 2023 · 0 comments
Open

Make use of array jobs on cluster #17

alexdewar opened this issue Sep 28, 2023 · 0 comments
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feature Adding a new functionality, small or large

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@alexdewar
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@davidorme reports that submitting individual jobs is slower. In any case, grouping some simulations together seems likely to be a bit faster in general

It may be that we can achieve this with Snakemake's job grouping feature: https://snakemake.readthedocs.io/en/stable/executing/grouping.html

@alexdewar alexdewar added the feature Adding a new functionality, small or large label Sep 28, 2023
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