simple_latex_maker.sh

DATE=$(date +"date-%Y-%m-%d_time-%H-%M-%S")

# This sometimes fixes an issue in my Sierra that stops stuff being found. Uncomment this line if you find PATH issues on OSX.
# export PATH="$PATH:/Library/TeX/Distributions/Programs/texbin"

pdflatex thesis.tex
bibtex thesis.aux
makeglossaries thesis
makeglossaries chapter_introduction
makeglossaries chapter_tmcomposition
makeglossaries chapter_tailanchor
makeglossaries chapter_predictfunction
makeglossaries chapter_conclusions
pdflatex thesis.tex
makeglossaries thesis
makeglossaries chapter_introduction
makeglossaries chapter_tmcomposition
makeglossaries chapter_tailanchor
makeglossaries chapter_predictfunction
makeglossaries chapter_conclusions
pdflatex thesis.tex
pdflatex thesis.tex

pdftotext thesis.pdf
echo "New lines, Wordcount, Characters"
wc thesis.txt
cp thesis.pdf ~/Dropbox/Manchester-PhD-Thesis.pdf
cp thesis.pdf pdfs/$DATE.pdf

#Cleaning up the junk files
## Core latex/pdflatex auxiliary files:
rm thesis.aux
rm thesis.lof
#rm thesis.log
rm thesis.lot
rm thesis.fls
rm thesis.out
rm thesis.toc
rm thesis.fmt
rm thesis.fot
rm thesis.cb
rm thesis.cb2rm
rm thesis.dvi
rm thesis.acn
rm thesis.glo
rm thesis.ist

## Gloassary output logs
rm thesis.glo
rm thesis.ist
rm thesis.acr
rm thesis.alg
rm thesis.glg
rm thesis.gls

## Bibliography auxiliary files (bibtex/biblatex/biber):
rm thesis.bbl
rm thesis.bcf
rm thesis.blg
rm thesis-blx.aux
rm thesis-blx.bib
rm thesis.brf
rm thesis.run.xml