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run_aicomp
executable file
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run_aicomp
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#!/bin/bash
# store input parameters
iparam[0]=$1
iparam[1]=$2
iparam[2]=$3
iparam[3]=$4
iparam[4]=$5
iparam[5]=$6
iparam[6]=$7
iparam[7]=$8
iparam[8]=$9
showhelp=0
# check if all input parameters are valid
inputfile="sample.ini"
i=0
while [ ! $i = $# ]
do
if [ ${iparam[$i]} = "--?" -o ${iparam[$i]} = "-?" -o ${iparam[$i]} = "?" -o ${iparam[$i]} = "--help" -o ${iparam[$i]} = "-help" -o ${iparam[$i]} = "help" ]
then
showhelp=1
fi
if [ ${iparam[$i]} = "-i" -o ${iparam[$i]} = "-input" ]
then
inputfile=${iparam[$((i+1))]}
fi
if [ ! -e $inputfile ]
then
echo "inputfile $inputfile does not exist..."
exit
fi
i=$((i+1))
done
# show help
if [ $showhelp = 1 ]
then
echo ""
echo "------------------------------------- HELP ------------------------------------"
echo " usage: ./run [option 1] ... [option n]"
echo ""
echo "-i paramfile, -input paramfile: run the code using a differernt paramter file."
echo " default: data_in.txt"
echo "-s, -shared: runs the program on the machines."
echo " specifed in >>shared.txt<<."
echo "-db, -debug: runs the program in debugging mode with additional check routines."
echo ""
echo "for further information we suggest to read the user documention in \"doc/\"."
echo ""
exit
fi
echo ""
echo "+- subspace correction methods for QCD applications -+"
echo "| |"
echo "| Use option >> -? << for help |"
echo "| |"
echo "+----------------------------------------------------+"
echo ""
# compute the number of processes
sed -e /'d0 global lattice:'/p -n $inputfile > tmplatticeg1.txt
cat tmplatticeg1.txt | grep 'global lattice' |
awk -F': ' '{printf $2}' > tmplatticeg2.txt
sed -e /'d0 local lattice:'/p -n $inputfile > tmplatticep1.txt
cat tmplatticep1.txt | grep 'local lattice' |
awk -F': ' '{printf $2}' > tmplatticep2.txt
sed -e /'d0 block lattice:'/p -n $inputfile > tmplatticel1.txt
cat tmplatticel1.txt | grep 'block lattice' |
awk -F': ' '{printf $2}' > tmplatticel2.txt
read -a zahl1 < tmplatticeg2.txt
read -a zahl2 < tmplatticep2.txt
read -a zahl4 < tmplatticel2.txt
i=0
np=1
numsub=1
while [ ! $i = 4 ]
do
zahl3=$((zahl1[$i]/zahl2[$i]))
np=$((np*zahl3))
zahl5=$((zahl1[$i]/zahl4[$i]))
numsub=$((numsub*zahl5))
i=$((i+1))
done
sd=$(printf %05i $numsub)
# check input parameters
ipa[0]=0
ipa[1]=0
ipa[2]=0
ipa[3]=0
inputfile=""
mydebug=""
i=0
while [ ! $i = $# ]
do
if [ ${iparam[$i]} = "-o" -o ${iparam[$i]} = "-output" ]
then
ipa[0]=1
elif [ ${iparam[$i]} = "-db" -o ${iparam[$i]} = "-debug" ]
then
ipa[1]=1
mydebug="debug_"
elif [ ${iparam[$i]} = "-shared" -o ${iparam[$i]} = "-s" ]
then
ipa[2]=1
elif [ ${iparam[$i]} = "-i" -o ${iparam[$i]} = "-input" ]
then
ipa[3]=1
inputfile=${iparam[$((i+1))]}
fi
i=$((i+1))
done
if [ ${ipa[2]} = 0 ]
then
myhost=$(hostname)
else
echo ""
echo "Running on the machines:"
myhost=""
for i in $(cat shared.txt)
do
echo $i
myhost=$myhost$i
done
fi
# name of output file
opf=${zahl1[0]}x${zahl1[1]}x${zahl1[2]}x${zahl1[3]}_np${np}_${myhost}_$(date +"%Y-%m-%d_%H-%M-%S")
# clean buffer files
rm tmplattice*
# some bla bla
if [ ${ipa[0]} = 1 ]
then
echo ""
echo "Outputfile: output/${opf}.txt"
fi
echo ""
echo "Number of Processes: $np"
echo "Program is being started..."
echo ""
if [ ${ipa[1]} = 0 ]
then
exec=bin/DDalphaAMG
else
exec=bin/DDalphaAMG_devel
echo "You chose the debug version"
echo ""
fi
if [ ${ipa[2]} = 0 ]
then
shareoption=""
else
shareoption="-machinefile shared.txt"
fi
# run programm
#MPIRUN=/opt/parastation/bin/mpiexec
#MPIRUN=/home/ramirez/installs/openmpi/dir/bin/mpirun
#NVPROF=
MPIRUN=mpirun
if [ ${ipa[0]} = 0 ]
then
# /opt/mpich/ch-p4/bin/mpirun $shareoption -np $np $exec $inputfile
#mpirun -default-hostfile /etc/openmpi-default-hostfile $shareoption -np $np $exec $inputfile
$MPIRUN -default-hostfile /etc/openmpi-default-hostfile $shareoption -np $np $NVPROF ./$exec $inputfile
#srun ./$exec $inputfile
else
cp $inputfile output/${opf}.txt
echo "" >> output/${opf}.txt
echo "" >> output/${opf}.txt
echo "+----------------------------------------------------------------------------------+" >> ../output/${opf}.txt
echo "| results |" >> ../output/${opf}.txt
echo "+----------------------------------------------------------------------------------+" >> ../output/${opf}.txt
echo "" >> output/${opf}.txt
echo "" >> output/${opf}.txt
#mpirun -default-hostfile /etc/openmpi-default-hostfile $shareoption -np $np $exec $inputfile >> ../output/${opf}.txt & disown
$MPIRUN -default-hostfile /etc/openmpi-default-hostfile $shareoption -np $np $NVPROF ./$exec $inputfile >> ../output/${opf}.txt & disown
#srun ./$exec $inputfile >> ../output/${opf}.txt & disown
fi