tests fail on 1.6-dev #107

AshtonSBradley · 2020-07-03T09:27:32Z

This could be highly premature, but just FYI

(@v1.6) pkg> test FastTransforms
    Testing FastTransforms
Status `/private/var/folders/3g/gsxf8njs27z_2ql1xk1gb7hw0000gn/T/jl_H4ExuP/Project.toml`
  [621f4979] AbstractFFTs v0.5.0
  [b99e7846] BinaryProvider v0.5.10
  [717857b8] DSP v0.6.6
  [7a1cc6ca] FFTW v1.2.2
  [442a2c76] FastGaussQuadrature v0.4.2
  [057dd010] FastTransforms v0.8.2
  [34b6f7d7] FastTransforms_jll v0.2.13+1
  [189a3867] Reexport v0.2.0
  [276daf66] SpecialFunctions v0.10.3
  [c751599d] ToeplitzMatrices v0.6.1
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [8dfed614] Test
Status `/private/var/folders/3g/gsxf8njs27z_2ql1xk1gb7hw0000gn/T/jl_H4ExuP/Manifest.toml`
  [621f4979] AbstractFFTs v0.5.0
  [b99e7846] BinaryProvider v0.5.10
  [e66e0078] CompilerSupportLibraries_jll v0.3.3+0
  [717857b8] DSP v0.6.6
  [9a962f9c] DataAPI v1.3.0
  [864edb3b] DataStructures v0.17.19
  [7a1cc6ca] FFTW v1.2.2
  [f5851436] FFTW_jll v3.3.9+5
  [442a2c76] FastGaussQuadrature v0.4.2
  [057dd010] FastTransforms v0.8.2
  [34b6f7d7] FastTransforms_jll v0.2.13+1
  [781609d7] GMP_jll v6.2.0+1
  [1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
  [c8e1da08] IterTools v1.3.0
  [856f044c] MKL_jll v2020.1.216+0
  [3a97d323] MPFR_jll v4.0.2+2
  [e1d29d7a] Missings v0.4.3
  [4536629a] OpenBLAS_jll v0.3.9+4
  [efe28fd5] OpenSpecFun_jll v0.5.3+3
  [bac558e1] OrderedCollections v1.3.0
  [f27b6e38] Polynomials v0.6.1
  [3cdcf5f2] RecipesBase v0.8.0
  [189a3867] Reexport v0.2.0
  [a2af1166] SortingAlgorithms v0.3.1
  [276daf66] SpecialFunctions v0.10.3
  [2913bbd2] StatsBase v0.32.2
  [c751599d] ToeplitzMatrices v0.6.1
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [b77e0a4c] InteractiveUtils
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [44cfe95a] Pkg
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [2f01184e] SparseArrays
  [10745b16] Statistics
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
ERROR: LoadError: LoadError: InitError: could not load library "/Users/abradley/.julia/artifacts/0f4c6d1a6848931c1eef5b6df0a32ec2ef5c89c7/lib/libgmpxx.4.dylib"
dlopen(/Users/abradley/.julia/artifacts/0f4c6d1a6848931c1eef5b6df0a32ec2ef5c89c7/lib/libgmpxx.4.dylib, 1): Library not loaded: @rpath/libgmp.10.dylib
  Referenced from: /Users/abradley/.julia/artifacts/0f4c6d1a6848931c1eef5b6df0a32ec2ef5c89c7/lib/libgmpxx.4.dylib
  Reason: Incompatible library version: libgmpxx.4.dylib requires version 15.0.0 or later, but libgmp.dylib provides version 14.0.0
Stacktrace:
  [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
    @ Base.Libc.Libdl ./libdl.jl:114
  [2] dlopen
    @ ./libdl.jl:114 [inlined]
  [3] __init__()
    @ GMP_jll ~/.julia/packages/GMP_jll/RbrIN/src/wrappers/x86_64-apple-darwin14-cxx11.jl:57
  [4] _include_from_serialized(path::String, depmods::Vector{Any})
    @ Base ./loading.jl:697
  [5] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String)
    @ Base ./loading.jl:782
  [6] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1007
  [7] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:928
  [8] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:923
  [9] include
    @ ./Base.jl:374 [inlined]
 [10] include(x::String)
    @ MPFR_jll ~/.julia/packages/MPFR_jll/Yb5S7/src/MPFR_jll.jl:1
 [11] top-level scope
    @ ~/.julia/packages/MPFR_jll/Yb5S7/src/MPFR_jll.jl:47
 [12] include
    @ ./Base.jl:374 [inlined]
 [13] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
    @ Base ./loading.jl:1219
 [14] top-level scope
    @ none:1
 [15] eval
    @ ./boot.jl:340 [inlined]
 [16] eval(x::Expr)
    @ Base.MainInclude ./client.jl:446
 [17] top-level scope
    @ none:1
during initialization of module GMP_jll
in expression starting at /Users/abradley/.julia/packages/MPFR_jll/Yb5S7/src/wrappers/x86_64-apple-darwin14.jl:4
in expression starting at /Users/abradley/.julia/packages/MPFR_jll/Yb5S7/src/MPFR_jll.jl:1
ERROR: LoadError: LoadError: Failed to precompile MPFR_jll [3a97d323-0669-5f0c-9066-3539efd106a3] to /Users/abradley/.julia/compiled/v1.6/MPFR_jll/NBMLS_5bBdn.ji.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:33
  [2] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1350
  [3] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1030
  [4] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:928
  [5] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:923
  [6] include
    @ ./Base.jl:374 [inlined]
  [7] include(x::String)
    @ FastTransforms_jll ~/.julia/packages/FastTransforms_jll/OzQ7R/src/FastTransforms_jll.jl:1
  [8] top-level scope
    @ ~/.julia/packages/FastTransforms_jll/OzQ7R/src/FastTransforms_jll.jl:50
  [9] include
    @ ./Base.jl:374 [inlined]
 [10] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
    @ Base ./loading.jl:1219
 [11] top-level scope
    @ none:1
 [12] eval
    @ ./boot.jl:340 [inlined]
 [13] eval(x::Expr)
    @ Base.MainInclude ./client.jl:446
 [14] top-level scope
    @ none:1
in expression starting at /Users/abradley/.julia/packages/FastTransforms_jll/OzQ7R/src/wrappers/x86_64-apple-darwin14-libgfortran5.jl:6
in expression starting at /Users/abradley/.julia/packages/FastTransforms_jll/OzQ7R/src/FastTransforms_jll.jl:1
ERROR: LoadError: LoadError: Failed to precompile FastTransforms_jll [34b6f7d7-08f9-5794-9e10-3819e4c7e49a] to /Users/abradley/.julia/compiled/v1.6/FastTransforms_jll/tPLVH_5bBdn.ji.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:33
  [2] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1350
  [3] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1030
  [4] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:928
  [5] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:923
  [6] top-level scope
    @ ~/.julia/packages/FastTransforms/MjTJy/src/libfasttransforms.jl:10
  [7] include
    @ ./Base.jl:374 [inlined]
  [8] include(x::String)
    @ FastTransforms ~/.julia/packages/FastTransforms/MjTJy/src/FastTransforms.jl:1
  [9] top-level scope
    @ ~/.julia/packages/FastTransforms/MjTJy/src/FastTransforms.jl:49
 [10] include
    @ ./Base.jl:374 [inlined]
 [11] include_package_for_output(input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId,UInt64}}, uuid_tuple::Tuple{UInt64,UInt64}, source::String)
    @ Base ./loading.jl:1219
 [12] top-level scope
    @ none:1
 [13] eval
    @ ./boot.jl:340 [inlined]
 [14] eval(x::Expr)
    @ Base.MainInclude ./client.jl:446
 [15] top-level scope
    @ none:1
in expression starting at /Users/abradley/.julia/packages/FastTransforms/MjTJy/src/libfasttransforms.jl:2
in expression starting at /Users/abradley/.julia/packages/FastTransforms/MjTJy/src/FastTransforms.jl:1
ERROR: LoadError: Failed to precompile FastTransforms [057dd010-8810-581a-b7be-e3fc3b93f78c] to /Users/abradley/.julia/compiled/v1.6/FastTransforms/5Lm8s_5bBdn.ji.
Stacktrace:
 [1] error(s::String)
   @ Base ./error.jl:33
 [2] compilecache(pkg::Base.PkgId, path::String)
   @ Base ./loading.jl:1350
 [3] _require(pkg::Base.PkgId)
   @ Base ./loading.jl:1030
 [4] require(uuidkey::Base.PkgId)
   @ Base ./loading.jl:928
 [5] require(into::Module, mod::Symbol)
   @ Base ./loading.jl:923
 [6] include(fname::String)
   @ Base.MainInclude ./client.jl:444
 [7] top-level scope
   @ none:6
in expression starting at /Users/abradley/.julia/packages/FastTransforms/MjTJy/test/runtests.jl:1
ERROR: Package FastTransforms errored during testing

AshtonSBradley · 2020-07-03T09:35:19Z

julia> versioninfo()
Julia Version 1.6.0-DEV.355
Commit 955beb6a91 (2020-07-02 10:28 UTC)
Platform Info:
  OS: macOS (x86_64-apple-darwin19.4.0)
  CPU: Intel(R) Core(TM) i5-8259U CPU @ 2.30GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
  JULIA_NUM_THREADS = 4

MikaelSlevinsky · 2020-07-03T15:04:49Z

Thanks for the report. This issue has been encountered #106, though it's not clear to me precisely what will happen in Julia v1.6+. This is in fact an issue with a dependency of a dependency, so I'd anticipate that this will be fixed externally.

AshtonSBradley · 2020-07-16T01:13:06Z

this seems to have been fixed. tests still freeze as previously reported, but don't error

MikaelSlevinsky · 2020-07-16T01:46:48Z

🐠

AshtonSBradley · 2021-03-28T05:28:39Z

giving this a go today on MacOS and julia 1.6, gives

     Testing Running tests...
Test Summary:     | Pass  Total
Special functions |   19     19
Test Summary:       | Pass  Total
Chebyshev transform |  358    358
Test Summary:                        | Pass  Total
Fejér and Clenshaw–Curtis quadrature |    9      9
ERROR: LoadError: LoadError: UndefVarError: set_num_threads not defined
Stacktrace:
 [1] getproperty(x::Module, f::Symbol)
   @ Base ./Base.jl:26
 [2] top-level scope
   @ ~/.julia/packages/FastTransforms/rXHu9/test/libfasttransformstests.jl:3
 [3] include(fname::String)
   @ Base.MainInclude ./client.jl:444
 [4] top-level scope
   @ ~/.julia/packages/FastTransforms/rXHu9/test/runtests.jl:6
 [5] include(fname::String)
   @ Base.MainInclude ./client.jl:444
 [6] top-level scope
   @ none:6
in expression starting at /Users/abradley/.julia/packages/FastTransforms/rXHu9/test/libfasttransformstests.jl:3
in expression starting at /Users/abradley/.julia/packages/FastTransforms/rXHu9/test/runtests.jl:6
ERROR: Package FastTransforms errored during testing

MikaelSlevinsky · 2021-03-28T16:13:20Z

Sorry, that was just me being sloppy. Should be fixed when 0.12.3 gets tagged. a46b963

AshtonSBradley closed this as completed Mar 30, 2022

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tests fail on 1.6-dev #107

tests fail on 1.6-dev #107

AshtonSBradley commented Jul 3, 2020

AshtonSBradley commented Jul 3, 2020

MikaelSlevinsky commented Jul 3, 2020

AshtonSBradley commented Jul 16, 2020

MikaelSlevinsky commented Jul 16, 2020

AshtonSBradley commented Mar 28, 2021

MikaelSlevinsky commented Mar 28, 2021

tests fail on 1.6-dev #107

tests fail on 1.6-dev #107

Comments

AshtonSBradley commented Jul 3, 2020

AshtonSBradley commented Jul 3, 2020

MikaelSlevinsky commented Jul 3, 2020

AshtonSBradley commented Jul 16, 2020

MikaelSlevinsky commented Jul 16, 2020

AshtonSBradley commented Mar 28, 2021

MikaelSlevinsky commented Mar 28, 2021