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Julia Version 1.5.0-DEV.0
Commit 13d1bd4689 (2019-12-31 18:18 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed Reexport ──────────────────── v0.2.0
Installed EcoBase ───────────────────── v0.0.7
Installed DataAPI ───────────────────── v1.1.0
Installed RecipesBase ───────────────── v0.7.0
Installed Compat ────────────────────── v2.2.0
Installed Diversity ─────────────────── v0.4.6
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed DataStructures ────────────── v0.17.6
Installed Parsers ───────────────────── v0.3.10
Installed Tables ────────────────────── v0.2.11
Installed TableTraits ───────────────── v1.0.0
Installed Requires ──────────────────── v0.5.2
Installed InvertedIndices ───────────── v1.0.0
Installed JSON ──────────────────────── v0.21.0
Installed DataFrames ────────────────── v0.20.0
Installed OrderedCollections ────────── v1.1.0
Installed DataValueInterfaces ───────── v1.0.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Missings ──────────────────── v0.4.3
Installed PooledArrays ──────────────── v0.5.3
Installed CategoricalArrays ─────────── v0.7.5
Updating `~/.julia/environments/v1.5/Project.toml`
[d3d5718d] + Diversity v0.4.6
Updating `~/.julia/environments/v1.5/Manifest.toml`
[324d7699] + CategoricalArrays v0.7.5
[34da2185] + Compat v2.2.0
[9a962f9c] + DataAPI v1.1.0
[a93c6f00] + DataFrames v0.20.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[d3d5718d] + Diversity v0.4.6
[a58aae7d] + EcoBase v0.0.7
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.3
[3cdcf5f2] + RecipesBase v0.7.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v0.5.2
[a2af1166] + SortingAlgorithms v0.3.1
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing Diversity
Updating `/tmp/jl_rGtDbL/Project.toml`
[no changes]
Updating `/tmp/jl_rGtDbL/Manifest.toml`
[no changes]
Running sandbox
Status `/tmp/jl_rGtDbL/Project.toml`
[34da2185] Compat v2.2.0
[a93c6f00] DataFrames v0.20.0
[d3d5718d] Diversity v0.4.6
[a58aae7d] EcoBase v0.0.7
[e1d29d7a] Missings v0.4.3
[3cdcf5f2] RecipesBase v0.7.0
[ae029012] Requires v0.5.2
[ Info: Running tests for files:
= API.jl
= Diversity.jl
= DiversityMeasure.jl
= Ecology.jl
= EffectiveNumbers.jl
= GeneralisedDiversities.jl
= Hill.jl
= Interface.jl
= Iterators.jl
= Jost.jl
= Metacommunity.jl
= Phylogenetics.jl
Test Summary: | Pass Total
* Testing API.jl | 2 2
Test Summary: |
* Testing Diversity.jl | No tests
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:56
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:56
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:56
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:56
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:57
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:57
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:57
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:57
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:59
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:59
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:59
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:59
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:61
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:61
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:61
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:61
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:63
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:63
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:63
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:63
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:65
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:65
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:65
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:65
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:67
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:67
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:67
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:67
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:69
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:69
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:69
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:69
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:72
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:72
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:72
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:72
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:76
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:76
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:77
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:77
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:82
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:82
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:84
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:84
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:88
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:88
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:89
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:89
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:91
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:91
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:91
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:91
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:95
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:95
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:96
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:96
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:99
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:99
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:104
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:104
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:105
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:105
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:106
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:106
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:107
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:107
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:115
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:115
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:118
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:118
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:121
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:121
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = top-level scope at test_DiversityMeasure.jl:123
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_DiversityMeasure.jl:123
Test Summary: | Pass Total
* Testing DiversityMeasure.jl | 67 67
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedrichness(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:50
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:50
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = richness(::Array{Float64,2}) at Ecology.jl:69
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:69
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = richness(::Array{Float64,2}) at Ecology.jl:69
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:69
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:20 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:20
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:20 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:20
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:21 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:21
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:21 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:21
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:115
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:115
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:115
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:115
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:116
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:116
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:117
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:117
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:26 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:26
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:26 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:26
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:27 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:27
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:27 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:27
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:179
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:179
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:179
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:179
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:180
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:180
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.UniqueTypes) at Ecology.jl:181
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:181
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:32 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:32
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:32 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:32
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:33 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:33
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:33 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:33
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Int64, ::Diversity.UniqueTypes) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Int64, ::Diversity.UniqueTypes) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Int64, ::Diversity.UniqueTypes) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedjaccard(::Array{Float64,2}, ::Int64, ::Diversity.UniqueTypes) at Ecology.jl:251
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:251
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Int64, ::Diversity.UniqueTypes) at Ecology.jl:252
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:252
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:38 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:38
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:39 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:39
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:39 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:39
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:43 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:43
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedrichness(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:50
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:50
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:49 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:49
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:51 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:51
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:51 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:51
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:115
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:115
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:115
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:115
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:116
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:116
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedshannon(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:117
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:117
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:58 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:58
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:60 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:60
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:60 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:60
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:179
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:179
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:179
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:179
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:180
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:180
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedsimpson(::Diversity.DiversityLevel, ::Array{Float64,2}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:181
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:181
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:66 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:66
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:68 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:68
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:68 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:68
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Float64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Float64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Float64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Float64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:251
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:251
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Float64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:252
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:252
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:74 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:74
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Int64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Int64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
Test Summary: | Pass Total
* Testing Ecology.jl | 26 26
┌ Warning: `setindex!(df::DataFrame, v::AbstractVector, col_ind::ColumnIndex)` is deprecated, use `begin
│ df[!, col_ind] = v
│ df
│ end` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Int64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:250
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:250
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Int64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:251
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:251
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = generalisedjaccard(::Array{Float64,2}, ::Array{Int64,1}, ::Diversity.GeneralTypes{Float64,Array{Float64,2}}) at Ecology.jl:252
└ @ Diversity.Ecology ~/.julia/packages/Diversity/WWymz/src/Ecology.jl:252
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Ecology.jl:75 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Ecology.jl:75
Test Summary: | Pass Total
* Testing EffectiveNumbers.jl | 41 41
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:11 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:11
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:12 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:12
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:27 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:27
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:27 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:27
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:28 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:28
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:28 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:28
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:29 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:29
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:29 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:29
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:30 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:30
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:30 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:30
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:32 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:32
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:32 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:32
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:33 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:33
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:33 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:33
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:34 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:34
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:34 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:34
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:35 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:35
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:35 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:35
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:37 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:37
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:37 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:37
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:38 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:38
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:38 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:38
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:39 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:39
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:39 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:39
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:40 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:40
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:40 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:40
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:43 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:43
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:43 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:43
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:44 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:44
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_GeneralisedDiversities.jl:44 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_GeneralisedDiversities.jl:44
Test Summary: | Pass Total
* Testing GeneralisedDiversities.jl | 16 16
┌ Warning: Implicit broadcasting to an existing column in DataFrame assignment is deprecated.Use an explicit broadcast with `df[:, col_ind] .= v`
│ caller = hillnumber(::Array{Float64,1}, ::Array{Int64,1}) at Hill.jl:29
└ @ Diversity.Hill ~/.julia/packages/Diversity/WWymz/src/Hill.jl:29
┌ Warning: `deletecols!(df::DataFrame, inds)` is deprecated, use `select!(df, Not(inds))` instead.
│ caller = hillnumber(::Array{Float64,1}, ::Array{Int64,1}) at Hill.jl:30
└ @ Diversity.Hill ~/.julia/packages/Diversity/WWymz/src/Hill.jl:30
┌ Warning: `getindex(df::DataFrame, col_ind::ColumnIndex)` is deprecated, use `df[!, col_ind]` instead.
│ caller = macro expansion at test_Hill.jl:17 [inlined]
└ @ Core ~/.julia/packages/Diversity/WWymz/test/test_Hill.jl:17
Test Summary: | Pass Total
* Testing Hill.jl | 8 8
Test Summary: | Pass Total
* Testing Interface.jl | 11 11
* Testing Iterators.jl: Error During Test at /home/pkgeval/.julia/packages/Diversity/WWymz/test/runtests.jl:21
Got exception outside of a @test
LoadError: ArgumentError: Package Phylo not found in current path:
- Run `import Pkg; Pkg.add("Phylo")` to install the Phylo package.
Stacktrace:
[1] require(::Module, ::Symbol) at ./loading.jl:892
[2] include(::String) at ./client.jl:439
[3] macro expansion at /home/pkgeval/.julia/packages/Diversity/WWymz/test/runtests.jl:22 [inlined]
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1189 [inlined]
[5] top-level scope at /home/pkgeval/.julia/packages/Diversity/WWymz/test/runtests.jl:0
[6] include(::String) at ./client.jl:439
[7] top-level scope at none:6
[8] eval(::Module, ::Any) at ./boot.jl:331
[9] exec_options(::Base.JLOptions) at ./client.jl:264
[10] _start() at ./client.jl:484
in expression starting at /home/pkgeval/.julia/packages/Diversity/WWymz/test/test_Iterators.jl:4
Test Summary: | Error Total
* Testing Iterators.jl | 1 1
Test Summary: | Error Total
* Testing Iterators.jl | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Diversity/WWymz/test/runtests.jl:21
caused by [exception 1]
Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/Diversity/WWymz/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/Diversity/WWymz/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package Diversity errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1471
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
[5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[11] top-level scope at none:12