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1.5.0-DEV-13d1bd4689.log
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1.5.0-DEV-13d1bd4689.log
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Julia Version 1.5.0-DEV.0
Commit 13d1bd4689 (2019-12-31 18:18 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed Tables ────────────────────── v0.2.11
Installed DataAPI ───────────────────── v1.1.0
Installed DataValueInterfaces ───────── v1.0.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed DataStructures ────────────── v0.17.6
Installed IterTools ─────────────────── v1.3.0
Installed Impute ────────────────────── v0.3.0
Installed StatsBase ─────────────────── v0.32.0
Installed Missings ──────────────────── v0.4.3
Installed OrderedCollections ────────── v1.1.0
Installed SortingAlgorithms ─────────── v0.3.1
Updating `~/.julia/environments/v1.5/Project.toml`
[f7bf1975] + Impute v0.3.0
Updating `~/.julia/environments/v1.5/Manifest.toml`
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[f7bf1975] + Impute v0.3.0
[c8e1da08] + IterTools v1.3.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[a2af1166] + SortingAlgorithms v0.3.1
[2913bbd2] + StatsBase v0.32.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
Testing Impute
Installed Compat ───────────── v3.2.0
Installed Reexport ─────────── v0.2.0
Installed WeakRefStrings ───── v0.6.2
Installed RData ────────────── v0.6.3
Installed DataFrames ───────── v0.20.0
Installed Mocking ──────────── v0.7.0
Installed AxisArrays ───────── v0.4.0
Installed Parsers ──────────── v0.3.10
Installed InvertedIndices ──── v1.0.0
Installed CodecZlib ────────── v0.6.0
Installed Requires ─────────── v1.0.0
Installed JSON ─────────────── v0.21.0
Installed BinaryProvider ───── v0.5.8
Installed RangeArrays ──────── v0.3.2
Installed IntervalSets ─────── v0.3.2
Installed EzXML ────────────── v0.9.5
Installed TranscodingStreams ─ v0.9.5
Installed TimeZones ────────── v0.10.3
Installed PooledArrays ─────── v0.5.3
Installed FilePathsBase ────── v0.7.0
Installed FileIO ───────────── v1.2.1
Installed CSV ──────────────── v0.5.21
Installed CategoricalArrays ── v0.7.5
Installed RDatasets ────────── v0.6.6
Updating `/tmp/jl_D9QAIg/Project.toml`
[39de3d68] + AxisArrays v0.4.0
[a93c6f00] + DataFrames v0.20.0
[ce6b1742] + RDatasets v0.6.6
[ade2ca70] + Dates
Updating `/tmp/jl_D9QAIg/Manifest.toml`
[39de3d68] + AxisArrays v0.4.0
[b99e7846] + BinaryProvider v0.5.8
[336ed68f] + CSV v0.5.21
[324d7699] + CategoricalArrays v0.7.5
[944b1d66] + CodecZlib v0.6.0
[34da2185] + Compat v3.2.0
[a93c6f00] + DataFrames v0.20.0
[8f5d6c58] + EzXML v0.9.5
[5789e2e9] + FileIO v1.2.1
[48062228] + FilePathsBase v0.7.0
[8197267c] + IntervalSets v0.3.2
[41ab1584] + InvertedIndices v1.0.0
[682c06a0] + JSON v0.21.0
[78c3b35d] + Mocking v0.7.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.3
[df47a6cb] + RData v0.6.3
[ce6b1742] + RDatasets v0.6.6
[b3c3ace0] + RangeArrays v0.3.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.0
[f269a46b] + TimeZones v0.10.3
[3bb67fe8] + TranscodingStreams v0.9.5
[ea10d353] + WeakRefStrings v0.6.2
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[9fa8497b] + Future
[76f85450] + LibGit2
[a63ad114] + Mmap
[44cfe95a] + Pkg
[3fa0cd96] + REPL
[ea8e919c] + SHA
[1a1011a3] + SharedArrays
[cf7118a7] + UUIDs
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Updating `/tmp/jl_0CbekT/Project.toml`
[no changes]
Updating `/tmp/jl_0CbekT/Manifest.toml`
[no changes]
Building EzXML ────→ `~/.julia/packages/EzXML/QtGgF/deps/build.log`
Updating `/tmp/jl_FFZi7l/Project.toml`
[no changes]
Updating `/tmp/jl_FFZi7l/Manifest.toml`
[no changes]
Building TimeZones → `~/.julia/packages/TimeZones/pjvlM/deps/build.log`
Updating `/tmp/jl_mOvXn9/Project.toml`
[no changes]
Updating `/tmp/jl_mOvXn9/Manifest.toml`
[no changes]
Running sandbox
Status `/tmp/jl_D9QAIg/Project.toml`
[39de3d68] AxisArrays v0.4.0
[a93c6f00] DataFrames v0.20.0
[f7bf1975] Impute v0.3.0
[c8e1da08] IterTools v1.3.0
[ce6b1742] RDatasets v0.6.6
[2913bbd2] StatsBase v0.32.0
[bd369af6] Tables v0.2.11
[ade2ca70] Dates
[10745b16] Statistics
[8dfed614] Test
┌ Warning: The following symbols will not be exported in future releases: chain, chain!, drop, drop!, interp and interp!.
│ Please qualify your calls with `Impute.<method>(...)` or explicitly import the symbol.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/Impute.jl:15
┌ Warning: The default limit for all impute functions will be 1.0 going forward.
│ If you depend on a specific threshold please pass in an appropriate `AbstractContext`.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/Impute.jl:22
GroupedDataFrame: Error During Test at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:357
Got exception outside of a @test
ArgumentError: broadcasting over `GroupedDataFrame`s is reserved
Stacktrace:
[1] broadcastable(::GroupedDataFrame{DataFrame}) at /home/pkgeval/.julia/packages/DataFrames/uPgZV/src/groupeddataframe/grouping.jl:18
[2] broadcasted(::Function, ::GroupedDataFrame{DataFrame}) at ./broadcast.jl:1229
[3] top-level scope at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:377
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:358
[6] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[7] top-level scope at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:335
[8] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[9] top-level scope at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:331
[10] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[11] top-level scope at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:26
[12] include(::String) at ./client.jl:439
[13] top-level scope at none:6
[14] eval(::Module, ::Any) at ./boot.jl:331
[15] exec_options(::Base.JLOptions) at ./client.jl:264
[16] _start() at ./client.jl:484
WARNING: Impute.Drop is deprecated, use DropObs instead.
likely near /home/pkgeval/.julia/packages/Impute/EgPBk/test/deprecated.jl:1
WARNING: Impute.Drop is deprecated, use DropObs instead.
likely near /home/pkgeval/.julia/packages/Impute/EgPBk/test/deprecated.jl:1
┌ Warning: impute(data, args...; kwargs...) is deprecated.
│ Please use Impute.method(data) or impute(data, imputor::Imputor).
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: impute!(data, method) is deprecated.
│ Please use Impute.method!(data) or impute!(data, imputor::Imputor).
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/deprecated.jl:174
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/deprecated.jl:174
┌ Warning: `Fill(val; kwargs...)` is deprecated, use `Fill(; value = val, kwargs...)` instead.
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/deprecated.jl:174
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=0.2)` in the future.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/deprecated.jl:174
┌ Warning: impute(data, args...; kwargs...) is deprecated.
│ Please use Impute.method(data) or impute(data, imputor::Imputor).
│ caller = macro expansion at deprecated.jl:111 [inlined]
└ @ Core ~/.julia/packages/Impute/EgPBk/test/deprecated.jl:111
┌ Warning: impute!(data, method) is deprecated.
│ Please use Impute.method!(data) or impute!(data, imputor::Imputor).
│ caller = impute(::Array{Union{Missing, Float64},1}, ::Symbol; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at deprecated.jl:96
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/deprecated.jl:96
┌ Warning: chain(data, args...) is deprecated.
│ Please use result = imp1(data) |> imp2 |> imp3
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: chain!(data, imputors...) is deprecated.
│ Please use data = imp1(data) |> imp2 |> imp3
│ caller = ip:0x0
└ @ Core :-1
┌ Warning: Passing `limit` directly to impute functions is deprecated. Please pass `context=Context(; limit=1.0)` in the future.
└ @ Impute ~/.julia/packages/Impute/EgPBk/src/deprecated.jl:174
Test Summary: | Pass Error Broken Total
Impute | 115 1 9 125
Equality | 6 6
Drop | 33 9 42
Interpolate | 6 6
Fill | 8 8
LOCF | 3 3
NOCB | 3 3
Not enough data | 2 2
Chain | 12 1 13
DataFrame | 4 1 5
GroupedDataFrame | 1 1
Column Table | 2 2
Row Table | 2 2
Matrix | 2 2
AxisArray | 2 2
Alternate missing functions | 2 2
Contexts | 5 5
Utils | 8 8
deprecated | 27 27
ERROR: LoadError: Some tests did not pass: 115 passed, 0 failed, 1 errored, 9 broken.
in expression starting at /home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl:24
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/Impute/EgPBk/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/Impute/EgPBk/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package Impute errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1471
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
[5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[11] top-level scope at none:12