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1.5.0-DEV-13d1bd4689.log
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1.5.0-DEV-13d1bd4689.log
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Julia Version 1.5.0-DEV.0
Commit 13d1bd4689 (2019-12-31 18:18 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed DataAPI ──────────── v1.1.0
Installed PDMats ───────────── v0.9.10
Installed FillArrays ───────── v0.8.2
Installed Arpack_jll ───────── v3.5.0+2
Installed MultipleTesting ──── v0.4.1
Installed QuadGK ───────────── v2.3.1
Installed DataStructures ───── v0.17.6
Installed StatsBase ────────── v0.32.0
Installed Missings ─────────── v0.4.3
Installed BinaryProvider ───── v0.5.8
Installed Rmath ────────────── v0.6.0
Installed OpenSpecFun_jll ──── v0.5.3+1
Installed Arpack ───────────── v0.4.0
Installed SpecialFunctions ─── v0.9.0
Installed OrderedCollections ─ v1.1.0
Installed Distributions ────── v0.21.11
Installed OpenBLAS_jll ─────── v0.3.7+2
Installed SortingAlgorithms ── v0.3.1
Installed StatsFuns ────────── v0.9.3
Updating `~/.julia/environments/v1.5/Project.toml`
[f8716d33] + MultipleTesting v0.4.1
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[b99e7846] + BinaryProvider v0.5.8
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[31c24e10] + Distributions v0.21.11
[1a297f60] + FillArrays v0.8.2
[e1d29d7a] + Missings v0.4.3
[f8716d33] + MultipleTesting v0.4.1
[4536629a] + OpenBLAS_jll v0.3.7+2
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.10
[1fd47b50] + QuadGK v2.3.1
[79098fc4] + Rmath v0.6.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Updating `/tmp/jl_wseL22/Project.toml`
[no changes]
Updating `/tmp/jl_wseL22/Manifest.toml`
[no changes]
Testing MultipleTesting
Updating `/tmp/jl_90JLQh/Project.toml`
[no changes]
Updating `/tmp/jl_90JLQh/Manifest.toml`
[no changes]
Running sandbox
Status `/tmp/jl_90JLQh/Project.toml`
[31c24e10] Distributions v0.21.11
[f8716d33] MultipleTesting v0.4.1
[276daf66] SpecialFunctions v0.9.0
[2913bbd2] StatsBase v0.32.0
[9a3f8284] Random
[8dfed614] Test
Test Summary: | Pass Total
Types | 29 29
Test Summary: | Pass Total
p-Value adjustment | 527 527
Test Summary: | Pass Total
p-Value π₀ adjustment | 15 15
Test Summary: | Pass Total
Grenander estimators | 19 19
Test Summary: | Pass Total
Utility functions | 47 47
Test Summary: | Pass Total
Models | 10 10
MultipleTesting.FisherCombination: Error During Test at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:72
Test threw exception
Expression: combine(PValues(pv), method()) isa T
MethodError: no method matching chisqccdf(::Float64, ::Float32)
Closest candidates are:
chisqccdf(::Union{Float64, Int64}, !Matched::Union{Float64, Int64}) at /home/pkgeval/.julia/packages/StatsFuns/HQmGj/src/rmath.jl:80
Stacktrace:
[1] ccdf(::Distributions.Chisq{Float64}, ::Float32) at /home/pkgeval/.julia/packages/Distributions/0vgDZ/src/univariates.jl:546
[2] combine(::MultipleTesting.PValues{Float32}, ::MultipleTesting.FisherCombination) at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/src/combinations.jl:80
[3] top-level scope at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:72
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1189
[5] top-level scope at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:47
[6] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[7] top-level scope at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:11
Wilkinson combination: Error During Test at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:112
Test threw exception
Expression: combine(PValues(pv), method) isa T
MethodError: no method matching betacdf(::Float64, ::Float64, ::Float32)
Closest candidates are:
betacdf(::Union{Float64, Int64}, ::Union{Float64, Int64}, !Matched::Union{Float64, Int64}) at /home/pkgeval/.julia/packages/StatsFuns/HQmGj/src/rmath.jl:77
Stacktrace:
[1] cdf(::Distributions.Beta{Float64}, ::Float32) at /home/pkgeval/.julia/packages/Distributions/0vgDZ/src/univariates.jl:545
[2] combine(::MultipleTesting.PValues{Float32}, ::MultipleTesting.WilkinsonCombination) at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/src/combinations.jl:311
[3] top-level scope at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:112
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:80
[6] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[7] top-level scope at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:11
Test Summary: | Pass Error Total
p-Value combinations | 152 2 154
MultipleTesting.FisherCombination | 14 1 15
MultipleTesting.LogitCombination | 15 15
MultipleTesting.TippettCombination | 15 15
MultipleTesting.SimesCombination | 15 15
MultipleTesting.StoufferCombination | 15 15
Wilkinson combination | 20 1 21
Minimum combination with MultipleTesting.BenjaminiHochberg | 16 16
Minimum combination with MultipleTesting.Sidak | 16 16
Weighted StoufferCombination | 16 16
Edge cases | 10 10
ERROR: LoadError: LoadError: Some tests did not pass: 152 passed, 0 failed, 2 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/test-combinations.jl:9
in expression starting at /home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/runtests.jl:13
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/MultipleTesting/7EV22/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/MultipleTesting/7EV22/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package MultipleTesting errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1471
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
[5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[11] top-level scope at none:12