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1.5.0-DEV-13d1bd4689.log
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Julia Version 1.5.0-DEV.0
Commit 13d1bd4689 (2019-12-31 18:18 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed DataValueInterfaces ───────── v1.0.0
Installed Tables ────────────────────── v0.2.11
Installed DataAPI ───────────────────── v1.1.0
Installed StatsModels ───────────────── v0.6.7
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed DataStructures ────────────── v0.17.6
Installed StatsBase ─────────────────── v0.32.0
Installed Missings ──────────────────── v0.4.3
Installed OrderedCollections ────────── v1.1.0
Installed ShiftedArrays ─────────────── v1.0.0
Installed SortingAlgorithms ─────────── v0.3.1
Updating `~/.julia/environments/v1.5/Project.toml`
[3eaba693] + StatsModels v0.6.7
Updating `~/.julia/environments/v1.5/Manifest.toml`
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.6
[e2d170a0] + DataValueInterfaces v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.1.0
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[2913bbd2] + StatsBase v0.32.0
[3eaba693] + StatsModels v0.6.7
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[4ec0a83e] + Unicode
Testing StatsModels
Installed Reexport ────────── v0.2.0
Installed InvertedIndices ─── v1.0.0
Installed JSON ────────────── v0.21.0
Installed Parsers ─────────── v0.3.10
Installed CategoricalArrays ─ v0.7.5
Installed DataFrames ──────── v0.20.0
Installed Compat ──────────── v3.2.0
Installed PooledArrays ────── v0.5.3
Updating `/tmp/jl_trrxiG/Project.toml`
[324d7699] + CategoricalArrays v0.7.5
[a93c6f00] + DataFrames v0.20.0
Updating `/tmp/jl_trrxiG/Manifest.toml`
[324d7699] + CategoricalArrays v0.7.5
[34da2185] + Compat v3.2.0
[a93c6f00] + DataFrames v0.20.0
[41ab1584] + InvertedIndices v1.0.0
[682c06a0] + JSON v0.21.0
[69de0a69] + Parsers v0.3.10
[2dfb63ee] + PooledArrays v0.5.3
[189a3867] + Reexport v0.2.0
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[9fa8497b] + Future
[76f85450] + LibGit2
[a63ad114] + Mmap
[44cfe95a] + Pkg
[3fa0cd96] + REPL
[ea8e919c] + SHA
[1a1011a3] + SharedArrays
[cf7118a7] + UUIDs
Running sandbox
Status `/tmp/jl_trrxiG/Project.toml`
[324d7699] CategoricalArrays v0.7.5
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.20.0
[864edb3b] DataStructures v0.17.6
[1277b4bf] ShiftedArrays v1.0.0
[2913bbd2] StatsBase v0.32.0
[3eaba693] StatsModels v0.6.7
[bd369af6] Tables v0.2.11
[37e2e46d] LinearAlgebra
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
Skipping StatsModels.LagTerm
Skipping StatsModels.dropterm
Model matrix: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:71
Expression: mm.m == [ones(4) x1e x2 [0, 10, 0, 0] [0, 0, 11, 0] [0, 0, 0, 12]]
Evaluated: [1.0 0.0 … 0.0 0.0; 1.0 1.0 … 0.0 0.0; 1.0 0.0 … 11.0 0.0; 1.0 0.0 … 0.0 12.0] == [1.0 0.0 … 0.0 0.0; 1.0 1.0 … 0.0 0.0; 1.0 0.0 … 11.0 0.0; 1.0 0.0 … 0.0 12.0]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:71
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:191
Expression: mm.m[:, 2:end] == [-1 -1 0; 1 0 -1; -1 1 0; 1 0 1; -1 -1 0; 1 0 -1; -1 1 0; 1 0 1]
Evaluated: [-1.0 1.0 … 0.0 0.0; 1.0 0.0 … 0.0 0.0; … ; -1.0 0.0 … 1.0 0.0; 1.0 0.0 … 0.0 1.0] == [-1 -1 0; 1 0 -1; … ; -1 1 0; 1 0 1]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:191
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:200
Expression: coefnames(mf) == ["(Intercept)", "x: b", "x: a & y: d", "x: b & y: d"]
Evaluated: ["(Intercept)", "x: b", "x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d"] == ["(Intercept)", "x: b", "x: a & y: d", "x: b & y: d"]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:200
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:229
Expression: mm.m == [1 0 0 0 -1 0; 0 1 0 0 0 -1; 0 0 1 0 -1 0; 0 0 0 1 0 -1; 1 0 0 0 1 0; 0 1 0 0 0 1; 0 0 1 0 1 0; 0 0 0 1 0 1]
Evaluated: [1.0 0.0 … 0.0 0.0; 0.0 1.0 … 0.0 0.0; … ; 0.0 0.0 … 1.0 0.0; 0.0 0.0 … 0.0 1.0] == [1 0 … -1 0; 0 1 … 0 -1; … ; 0 0 … 1 0; 0 0 … 0 1]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:229
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:238
Expression: coefnames(mf) == ["x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: f", "x: b & z: f"]
Evaluated: Any["x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: e", "x: b & z: e", "x: a & z: f", "x: b & z: f"] == ["x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: f", "x: b & z: f"]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:238
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:247
Expression: mm.m == [1 0 0 0 -1 0 1 0; 0 1 0 0 0 -1 0 1; 0 0 1 0 -1 0 -1 0; 0 0 0 1 0 -1 0 -1; 1 0 0 0 1 0 -1 0; 0 1 0 0 0 1 0 -1; 0 0 1 0 1 0 1 0; 0 0 0 1 0 1 0 1]
Evaluated: [1.0 0.0 … 1.0 0.0; 0.0 1.0 … 0.0 1.0; … ; 0.0 0.0 … 1.0 0.0; 0.0 0.0 … 0.0 1.0] == [1 0 … 1 0; 0 1 … 0 1; … ; 0 0 … 1 0; 0 0 … 0 1]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:247
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:256
Expression: coefnames(mf) == ["x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: f", "x: b & z: f", "x: a & y: d & z: f", "x: b & y: d & z: f"]
Evaluated: Any["x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: e", "x: b & z: e", "x: a & z: f", "x: b & z: f", "x: a & y: d & z: f", "x: b & y: d & z: f"] == ["x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: f", "x: b & z: f", "x: a & y: d & z: f", "x: b & y: d & z: f"]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:256
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:266
Expression: mm.m == [1 0 -1 0 -1 0; 0 1 0 -1 0 -1; 1 0 1 0 -1 0; 0 1 0 1 0 -1; 1 0 -1 0 1 0; 0 1 0 -1 0 1; 1 0 1 0 1 0; 0 1 0 1 0 1]
Evaluated: [1.0 0.0 … 0.0 0.0; 0.0 1.0 … 0.0 0.0; … ; 1.0 0.0 … 1.0 0.0; 0.0 1.0 … 0.0 1.0] == [1 0 … -1 0; 0 1 … 0 -1; … ; 1 0 … 1 0; 0 1 … 0 1]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:266
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
non-redundant categorical terms: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:275
Expression: coefnames(mf) == ["x: a", "x: b", "x: a & y: d", "x: b & y: d", "x: a & z: f", "x: b & z: f"]
Evaluated: Any["x: a", "x: b", "x: a & y: c", "x: b & y: c", "x: a & y: d", "x: b & y: d", "x: a & z: e", "x: b & z: e", "x: a & z: f", "x: b & z: f"] == ["x: a", "x: b", "x: a & y: d", "x: b & y: d", "x: a & z: f", "x: b & z: f"]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:275
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:159
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
#95: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:371
Expression: size(modelmatrix(mf)) == size(modelmatrix(mf_helm2))
Evaluated: (8, 17) == (8, 8)
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:371
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:355
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:354
[6] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[7] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
#95: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:372
Expression: modelmatrix(mf_helm) == modelmatrix(mf_helm2)
Evaluated: [1.0 -1.0 … 1.0 -1.0; 1.0 1.0 … 1.0 1.0; … ; 1.0 -1.0 … 0.0 -1.0; 1.0 1.0 … 0.0 1.0] == [1.0 -1.0 … 1.0 -1.0; 1.0 1.0 … 1.0 1.0; … ; 1.0 -1.0 … 1.0 -1.0; 1.0 1.0 … 1.0 1.0]
Stacktrace:
[1] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:372
[2] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[3] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:355
[4] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:354
[6] top-level scope at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116
[7] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelmatrix.jl:3
#133: Test Failed at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelframe.jl:10
Expression: mm.assign == [1, 2, 2, 3, 4, 4]
Evaluated: [1, 2, 2, 3, 4, 4, 4, 4, 4, 4] == [1, 2, 2, 3, 4, 4]
Stacktrace:
[1] macro expansion at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelframe.jl:10 [inlined]
[2] macro expansion at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116 [inlined]
[3] macro expansion at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelframe.jl:4 [inlined]
[4] macro expansion at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1116 [inlined]
[5] top-level scope at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/modelframe.jl:3
Skipping StatsModels.LagTerm
Skipping StatsModels.dropterm
Test Summary: | Pass Fail Broken Total
StatsModels | 519 12 8 539
Ambiguity detection | 1 1
formula | 59 2 61
terms | 273 273
Temporal Terms | 21 2 23
schemas | 1 1
Model matrix | 70 11 2 83
non-redundant categorical terms | 14 8 2 24
arbitrary functions in formulae | 5 5
row-wise model matrix construction | 1 1
setcontrasts! | 1 2 3
#95 | 1 2 3
#136 | 1 1
ModelFrame (legacy API) | 1 1
#133 | 1 1
stat model types | 30 30
contrasts | 38 1 39
Extended formula/models | 26 1 27
ERROR: LoadError: Some tests did not pass: 519 passed, 12 failed, 0 errored, 8 broken.
in expression starting at /home/pkgeval/.julia/packages/StatsModels/9cHwk/test/runtests.jl:22
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/StatsModels/9cHwk/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/StatsModels/9cHwk/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package StatsModels errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1471
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:300
[5] #test#66 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[6] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[8] test at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[10] test(::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:292
[11] top-level scope at none:12