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1.6.0-DEV-bf8a8e8f9c.log
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Julia Version 1.6.0-DEV.654
Commit bf8a8e8f9c (2020-08-18 16:25 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
[ Info: LEGAL NOTICE: package operations send anonymous data about your system to https://pkg.julialang.org (your current package server), including the operating system and Julia versions you are using, and a random client UUID. Running `Pkg.telemetryinfo()` will show exactly what data is sent. See https://julialang.org/legal/data/ for more details about what this data is used for, how long it is retained, and how to opt out of sending it.
Installed OrderedCollections ────────── v1.3.0
Installed TableTraits ───────────────── v1.0.0
Installed TableTraitsUtils ──────────── v1.0.1
Installed Compat ────────────────────── v3.14.0
Installed Parsers ───────────────────── v1.0.10
Installed JSON ──────────────────────── v0.21.0
Installed Query ─────────────────────── v1.0.0
Installed DataValues ────────────────── v0.4.13
Installed TableShowUtils ────────────── v0.2.5
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed Missings ──────────────────── v0.4.3
Installed Requires ──────────────────── v1.0.1
Installed DataStructures ────────────── v0.18.0
Installed IterableTables ────────────── v1.0.0
Installed MacroTools ────────────────── v0.5.5
Installed QueryOperators ────────────── v0.9.1
Installed DataAPI ───────────────────── v1.3.0
Installed DataValueInterfaces ───────── v1.0.0
Updating `~/.julia/environments/v1.6/Project.toml`
[1a8c2f83] + Query v1.0.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[34da2185] + Compat v3.14.0
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.18.0
[e2d170a0] + DataValueInterfaces v1.0.0
[e7dc6d0d] + DataValues v0.4.13
[1c8ee90f] + IterableTables v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.0
[1914dd2f] + MacroTools v0.5.5
[e1d29d7a] + Missings v0.4.3
[bac558e1] + OrderedCollections v1.3.0
[69de0a69] + Parsers v1.0.10
[1a8c2f83] + Query v1.0.0
[2aef5ad7] + QueryOperators v0.9.1
[ae029012] + Requires v1.0.1
[5e66a065] + TableShowUtils v0.2.5
[3783bdb8] + TableTraits v1.0.0
[382cd787] + TableTraitsUtils v1.0.1
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing Query
Status `/tmp/jl_5ZFUei/Project.toml`
[a93c6f00] DataFrames v0.21.6
[e7dc6d0d] DataValues v0.4.13
[e30172f5] Documenter v0.25.2
[6deec6e2] IndexedTables v0.13.0
[1c8ee90f] IterableTables v1.0.0
[1914dd2f] MacroTools v0.5.5
[1a8c2f83] Query v1.0.0
[2aef5ad7] QueryOperators v0.9.1
[9d95f2ec] TypedTables v1.2.0
[ade2ca70] Dates
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_5ZFUei/Manifest.toml`
[1520ce14] AbstractTrees v0.3.3
[79e6a3ab] Adapt v2.0.2
[324d7699] CategoricalArrays v0.8.1
[34da2185] Compat v3.14.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.6
[864edb3b] DataStructures v0.18.0
[e2d170a0] DataValueInterfaces v1.0.0
[e7dc6d0d] DataValues v0.4.13
[85a47980] Dictionaries v0.3.2
[ffbed154] DocStringExtensions v0.8.2
[e30172f5] Documenter v0.25.2
[6deec6e2] IndexedTables v0.13.0
[313cdc1a] Indexing v1.1.0
[41ab1584] InvertedIndices v1.0.0
[1c8ee90f] IterableTables v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[1914dd2f] MacroTools v0.5.5
[e1d29d7a] Missings v0.4.3
[925886fa] OnlineStatsBase v1.4.3
[bac558e1] OrderedCollections v1.3.0
[69de0a69] Parsers v1.0.10
[2dfb63ee] PooledArrays v0.5.3
[1a8c2f83] Query v1.0.0
[2aef5ad7] QueryOperators v0.9.1
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.1
[a2af1166] SortingAlgorithms v0.3.1
[03a91e81] SplitApplyCombine v1.1.3
[2913bbd2] StatsBase v0.32.0
[09ab397b] StructArrays v0.4.4
[5e66a065] TableShowUtils v0.2.5
[3783bdb8] TableTraits v1.0.0
[382cd787] TableTraitsUtils v1.0.1
[bd369af6] Tables v1.0.5
[9d95f2ec] TypedTables v1.2.0
[ea10d353] WeakRefStrings v0.6.2
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[ Info: SetupBuildDirectory: setting up build directory.
[ Info: Doctest: running doctests.
┌ Error: doctest failure in ~/.julia/packages/Query/85Sw7/docs/src/linqquerycommands.md:218-242
│
│ ```jldoctest
│ using Query, DataFrames
│
│ source_df1 = DataFrame(a=[1,2,3], b=[1.,2.,3.])
│ source_df2 = DataFrame(c=[2,4,2], d=["John", "Jim","Sally"])
│
│ q = @from i in source_df1 begin
│ @left_outer_join j in source_df2 on i.a equals j.c
│ @select {i.a,i.b,j.c,j.d}
│ @collect DataFrame
│ end
│
│ println(q)
│
│ # output
│
│ 4×4 DataFrame
│ │ Row │ a │ b │ c │ d │
│ │ │ Int64 │ Float64 │ Int64⍰ │ String⍰ │
│ ├─────┼───────┼─────────┼─────────┼─────────┤
│ │ 1 │ 1 │ 1.0 │ missing │ missing │
│ │ 2 │ 2 │ 2.0 │ 2 │ John │
│ │ 3 │ 2 │ 2.0 │ 2 │ Sally │
│ │ 4 │ 3 │ 3.0 │ missing │ missing │
│ ```
│
│ Subexpression:
│
│ using Query, DataFrames
│
│ source_df1 = DataFrame(a=[1,2,3], b=[1.,2.,3.])
│ source_df2 = DataFrame(c=[2,4,2], d=["John", "Jim","Sally"])
│
│ q = @from i in source_df1 begin
│ @left_outer_join j in source_df2 on i.a equals j.c
│ @select {i.a,i.b,j.c,j.d}
│ @collect DataFrame
│ end
│
│ println(q)
│
│ Evaluated output:
│
│ 4×4 DataFrame
│ │ Row │ a │ b │ c │ d │
│ │ │ Int64 │ Float64 │ Int64? │ String? │
│ ├─────┼───────┼─────────┼─────────┼─────────┤
│ │ 1 │ 1 │ 1.0 │ missing │ missing │
│ │ 2 │ 2 │ 2.0 │ 2 │ John │
│ │ 3 │ 2 │ 2.0 │ 2 │ Sally │
│ │ 4 │ 3 │ 3.0 │ missing │ missing │
│
│ Expected output:
│
│ 4×4 DataFrame
│ │ Row │ a │ b │ c │ d │
│ │ │ Int64 │ Float64 │ Int64⍰ │ String⍰ │
│ ├─────┼───────┼─────────┼─────────┼─────────┤
│ │ 1 │ 1 │ 1.0 │ missing │ missing │
│ │ 2 │ 2 │ 2.0 │ 2 │ John │
│ │ 3 │ 2 │ 2.0 │ 2 │ Sally │
│ │ 4 │ 3 │ 3.0 │ missing │ missing │
│
│ diff =
│ Warning: Diff output requires color.
│ 4×4 DataFrame
│ │ Row │ a │ b │ c │ d │
│ │ │ Int64 │ Float64 │ Int64⍰ Int64? │ String⍰ String? │
│ ├─────┼───────┼─────────┼─────────┼─────────┤
│ │ 1 │ 1 │ 1.0 │ missing │ missing │
│ │ 2 │ 2 │ 2.0 │ 2 │ John │
│ │ 3 │ 2 │ 2.0 │ 2 │ Sally │
│ │ 4 │ 3 │ 3.0 │ missing │ missing │
└ @ Documenter.DocTests ~/.julia/packages/Documenter/pjwqp/src/DocTests.jl:369
┌ Error: doctest failure in ~/.julia/packages/Query/85Sw7/docs/src/standalonequerycommands.md:463-480
│
│ ```jldoctest
│ using Query, DataFrames
│
│ df = DataFrame(a=[1,2,missing], b=[4,missing,5])
│
│ q = df |> @filter(!isna(_.b)) |> @dissallowna(:b) |> DataFrame
│
│ println(q)
│
│ # output
│
│ 2×2 DataFrame
│ │ Row │ a │ b │
│ │ │ Int64⍰ │ Int64 │
│ ├─────┼─────────┼───────┤
│ │ 1 │ 1 │ 4 │
│ │ 2 │ missing │ 5 │
│ ```
│
│ Subexpression:
│
│ using Query, DataFrames
│
│ df = DataFrame(a=[1,2,missing], b=[4,missing,5])
│
│ q = df |> @filter(!isna(_.b)) |> @dissallowna(:b) |> DataFrame
│
│ println(q)
│
│ Evaluated output:
│
│ 2×2 DataFrame
│ │ Row │ a │ b │
│ │ │ Int64? │ Int64 │
│ ├─────┼─────────┼───────┤
│ │ 1 │ 1 │ 4 │
│ │ 2 │ missing │ 5 │
│
│ Expected output:
│
│ 2×2 DataFrame
│ │ Row │ a │ b │
│ │ │ Int64⍰ │ Int64 │
│ ├─────┼─────────┼───────┤
│ │ 1 │ 1 │ 4 │
│ │ 2 │ missing │ 5 │
│
│ diff =
│ Warning: Diff output requires color.
│ 2×2 DataFrame
│ │ Row │ a │ b │
│ │ │ Int64⍰ Int64? │ Int64 │
│ ├─────┼─────────┼───────┤
│ │ 1 │ 1 │ 4 │
│ │ 2 │ missing │ 5 │
└ @ Documenter.DocTests ~/.julia/packages/Documenter/pjwqp/src/DocTests.jl:369
┌ Error: Doctesting failed
│ exception =
│ `makedocs` encountered a doctest error. Terminating build
│ Stacktrace:
│ [1] error(s::String)
│ @ Base ./error.jl:33
│ [2] runner(#unused#::Type{Documenter.Builder.Doctest}, doc::Documenter.Documents.Document)
│ @ Documenter.Builder ~/.julia/packages/Documenter/pjwqp/src/Builder.jl:217
│ [3] dispatch(#unused#::Type{Documenter.Builder.DocumentPipeline}, x::Documenter.Documents.Document)
│ @ Documenter.Utilities.Selectors ~/.julia/packages/Documenter/pjwqp/src/Utilities/Selectors.jl:167
│ [4] #2
│ @ ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:241 [inlined]
│ [5] cd(f::Documenter.var"#2#3"{Documenter.Documents.Document}, dir::String)
│ @ Base.Filesystem ./file.jl:104
│ [6] makedocs(; debug::Bool, format::Documenter.Writers.HTMLWriter.HTML, kwargs::Base.Iterators.Pairs{Symbol,Any,NTuple{5,Symbol},NamedTuple{(:root, :source, :sitename, :doctest, :modules),Tuple{String,String,String,Symbol,Vector{Module}}}})
│ @ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:240
│ [7] (::Documenter.var"#all_doctests#31"{Bool,Vector{Module}})()
│ @ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:802
│ [8] macro expansion
│ @ ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:818 [inlined]
│ [9] macro expansion
│ @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1114 [inlined]
│ [10] doctest(source::String, modules::Vector{Module}; fix::Bool, testset::String)
│ @ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:818
│ [11] doctest(package::Module; manual::Bool, testset::Nothing, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
│ @ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:761
│ [12] doctest(package::Module)
│ @ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:748
│ [13] top-level scope
│ @ ~/.julia/packages/Query/85Sw7/test/runtests.jl:501
│ [14] top-level scope
│ @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1114
│ [15] top-level scope
│ @ ~/.julia/packages/Query/85Sw7/test/runtests.jl:15
│ [16] include(fname::String)
│ @ Base.MainInclude ./client.jl:443
│ [17] top-level scope
│ @ none:6
│ [18] eval(m::Module, e::Any)
│ @ Core ./boot.jl:344
│ [19] exec_options(opts::Base.JLOptions)
│ @ Base ./client.jl:260
│ [20] _start()
│ @ Base ./client.jl:484
└ @ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:811
Doctests: Query: Test Failed at /home/pkgeval/.julia/packages/Documenter/pjwqp/src/Documenter.jl:818
Expression: all_doctests()
Stacktrace:
[1] macro expansion
@ ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:818 [inlined]
[2] macro expansion
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1114 [inlined]
[3] doctest(source::String, modules::Vector{Module}; fix::Bool, testset::String)
@ Documenter ~/.julia/packages/Documenter/pjwqp/src/Documenter.jl:818
Test Summary: | Pass Fail Total
Queries | 261 1 262
Utilities | 17 17
shift_access! | 2 2
a.b Syntax (dplyr API) | 8 8
Pipe Syntax | 4 4
Select Macro | 13 13
Rename Macro | 6 6
Mutate Macro | 3 3
@dropna | 6 6
@replacena | 6 6
@dissallowna | 4 4
Doctests: Query | 1 1
ERROR: LoadError: Some tests did not pass: 261 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Query/85Sw7/test/runtests.jl:13
ERROR: Package Query errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1567
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:328
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:315
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:16