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1.4.0-DEV-082f446f52.log
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Julia Version 1.4.0-DEV.674
Commit 082f446f52 (2020-01-02 16:59 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-8.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
Resolving package versions...
Installed VersionParsing ───── v1.2.0
Installed LegacyStrings ────── v0.4.1
Installed CMake ────────────── v1.1.2
Installed Parsers ──────────── v0.3.10
Installed Compat ───────────── v2.2.0
Installed JLD ──────────────── v0.9.1
Installed MacroTools ───────── v0.5.3
Installed OrderedCollections ─ v1.1.0
Installed BinaryProvider ───── v0.5.8
Installed PyCallJLD ────────── v0.1.0
Installed URIParser ────────── v0.4.0
Installed Parameters ───────── v0.12.0
Installed BinDeps ──────────── v1.0.0
Installed Conda ────────────── v1.3.0
Installed PyCall ───────────── v1.91.2
Installed JSON ─────────────── v0.21.0
Installed DataStructures ───── v0.17.6
Installed HDF5 ─────────────── v0.12.5
Installed CMakeWrapper ─────── v0.2.3
Installed Blosc ────────────── v0.5.1
Installed FileIO ───────────── v1.2.1
Updating `~/.julia/environments/v1.4/Project.toml`
[de320387] + PyCallJLD v0.1.0
Updating `~/.julia/environments/v1.4/Manifest.toml`
[9e28174c] + BinDeps v1.0.0
[b99e7846] + BinaryProvider v0.5.8
[a74b3585] + Blosc v0.5.1
[631607c0] + CMake v1.1.2
[d5fb7624] + CMakeWrapper v0.2.3
[34da2185] + Compat v2.2.0
[8f4d0f93] + Conda v1.3.0
[864edb3b] + DataStructures v0.17.6
[5789e2e9] + FileIO v1.2.1
[f67ccb44] + HDF5 v0.12.5
[4138dd39] + JLD v0.9.1
[682c06a0] + JSON v0.21.0
[1b4a561d] + LegacyStrings v0.4.1
[1914dd2f] + MacroTools v0.5.3
[bac558e1] + OrderedCollections v1.1.0
[d96e819e] + Parameters v0.12.0
[69de0a69] + Parsers v0.3.10
[438e738f] + PyCall v1.91.2
[de320387] + PyCallJLD v0.1.0
[30578b45] + URIParser v0.4.0
[81def892] + VersionParsing v1.2.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[9abbd945] + Profile
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building CMake ─→ `~/.julia/packages/CMake/nSK2r/deps/build.log`
Updating `/tmp/jl_1Ttn4f/Project.toml`
[no changes]
Updating `/tmp/jl_1Ttn4f/Manifest.toml`
[no changes]
Building Conda ─→ `~/.julia/packages/Conda/kLXeC/deps/build.log`
Updating `/tmp/jl_s0x8SU/Project.toml`
[no changes]
Updating `/tmp/jl_s0x8SU/Manifest.toml`
[no changes]
Building PyCall → `~/.julia/packages/PyCall/ttONZ/deps/build.log`
Updating `/tmp/jl_19Q4EB/Project.toml`
[no changes]
Updating `/tmp/jl_19Q4EB/Manifest.toml`
[no changes]
Building Blosc ─→ `~/.julia/packages/Blosc/lzFr0/deps/build.log`
Updating `/tmp/jl_2JgYFJ/Project.toml`
[no changes]
Updating `/tmp/jl_2JgYFJ/Manifest.toml`
[no changes]
Building HDF5 ──→ `~/.julia/packages/HDF5/Zh9on/deps/build.log`
Updating `/tmp/jl_H9tfcU/Project.toml`
[no changes]
Updating `/tmp/jl_H9tfcU/Manifest.toml`
[no changes]
Testing PyCallJLD
Updating `/tmp/jl_qz7Rhu/Project.toml`
[no changes]
Updating `/tmp/jl_qz7Rhu/Manifest.toml`
[no changes]
Running sandbox
Status `/tmp/jl_qz7Rhu/Project.toml`
[4138dd39] JLD v0.9.1
[438e738f] PyCall v1.91.2
[de320387] PyCallJLD v0.1.0
[8dfed614] Test
┌ Warning: `getindex(o::PyObject, s::AbstractString)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o."s"` instead of `o["s"]`.
│ caller = __init__() at PyCallJLD.jl:12
└ @ PyCallJLD ~/.julia/packages/PyCallJLD/Tfc36/src/PyCallJLD.jl:12
┌ Warning: `getindex(o::PyObject, s::AbstractString)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o."s"` instead of `o["s"]`.
│ caller = __init__() at PyCallJLD.jl:13
└ @ PyCallJLD ~/.julia/packages/PyCallJLD/Tfc36/src/PyCallJLD.jl:13
┌ Warning: `getindex(o::PyObject, s::AbstractString)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o."s"` instead of `o["s"]`.
│ caller = top-level scope at runtests.jl:6
└ @ Core ~/.julia/packages/PyCallJLD/Tfc36/test/runtests.jl:6
Error During Test at /home/pkgeval/.julia/packages/PyCallJLD/Tfc36/test/runtests.jl:11
Test threw exception
Expression: load(tmp, "x") == obj
setfield! immutable struct of type PyObjectSerialization cannot be changed
Stacktrace:
[1] macro expansion at /home/pkgeval/.julia/packages/JLD/1BoSz/src/jld_types.jl:434 [inlined]
[2] jlconvert(::Type{PyCallJLD.PyObjectSerialization}, ::JLD.JldFile, ::Ptr{UInt8}) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/jld_types.jl:560
[3] read_scalar(::JLD.JldDataset, ::HDF5.HDF5Datatype, ::Type{T} where T) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:398
[4] read(::JLD.JldDataset) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:370
[5] read_ref(::JLD.JldFile, ::HDF5.HDF5ReferenceObj) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:502
[6] read_refs(::JLD.JldDataset, ::Type{PyObject}, ::Int64, ::Int64, ::Tuple{Int64}) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:475
[7] read_array(::JLD.JldDataset, ::HDF5.HDF5Datatype, ::Int64, ::Int64, ::Tuple{Int64}) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:409
[8] read_array(::JLD.JldDataset, ::HDF5.HDF5Datatype, ::Int64, ::Int64) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:408
[9] read(::JLD.JldDataset) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:372
[10] read(::JLD.JldFile, ::String) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:346
[11] #42 at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:1240 [inlined]
[12] jldopen(::JLD.var"#42#43"{String}, ::String, ::Vararg{String,N} where N; kws::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:246
[13] jldopen at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:244 [inlined]
[14] load at /home/pkgeval/.julia/packages/JLD/1BoSz/src/JLD.jl:1239 [inlined]
[15] load(::String, ::String; options::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /home/pkgeval/.julia/packages/FileIO/I1ONY/src/loadsave.jl:118
[16] load(::String, ::String) at /home/pkgeval/.julia/packages/FileIO/I1ONY/src/loadsave.jl:118
[17] top-level scope at /home/pkgeval/.julia/packages/PyCallJLD/Tfc36/test/runtests.jl:11
[18] include(::String) at ./client.jl:439
[19] top-level scope at none:6
[20] eval(::Module, ::Any) at ./boot.jl:331
[21] exec_options(::Base.JLOptions) at ./client.jl:264
[22] _start() at ./client.jl:484
ERROR: LoadError: There was an error during testing
in expression starting at /home/pkgeval/.julia/packages/PyCallJLD/Tfc36/test/runtests.jl:8
err = ProcessFailedException(Base.Process[Process(`/opt/julia/bin/julia -Cnative -J/opt/julia/lib/julia/sys.so -g1 --code-coverage=none --color=no --compiled-modules=yes --check-bounds=yes --inline=yes --startup-file=no --track-allocation=none --eval 'append!(empty!(Base.DEPOT_PATH), ["/home/pkgeval/.julia", "/opt/julia/local/share/julia", "/opt/julia/share/julia", "/usr/local/share/julia"])
append!(empty!(Base.DL_LOAD_PATH), String[])
cd("/home/pkgeval/.julia/packages/PyCallJLD/Tfc36/test")
append!(empty!(ARGS), String[])
include("/home/pkgeval/.julia/packages/PyCallJLD/Tfc36/test/runtests.jl")
'`, ProcessExited(1))])
ERROR: Package PyCallJLD errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Types.jl:54
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/Operations.jl:1471
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:313
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:300
[5] #test#66 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:294 [inlined]
[7] #test#65 at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:293 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.4/Pkg/src/API.jl:292
[11] top-level scope at none:12