-
Notifications
You must be signed in to change notification settings - Fork 5
/
1.5.0-DEV-fbc2c0aec1.log
266 lines (259 loc) · 12.6 KB
/
1.5.0-DEV-fbc2c0aec1.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
Julia Version 1.5.0-DEV.221
Commit fbc2c0aec1 (2020-02-01 18:55 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed OpenSpecFun_jll ───────────── v0.5.3+1
Installed Arpack_jll ────────────────── v3.5.0+2
Installed Rmath ─────────────────────── v0.6.0
Installed FillArrays ────────────────── v0.8.4
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed TableTraits ───────────────── v1.0.0
Installed QuadGK ────────────────────── v2.3.1
Installed GLM ───────────────────────── v1.3.6
Installed DataAPI ───────────────────── v1.1.0
Installed SortingAlgorithms ─────────── v0.3.1
Installed Missings ──────────────────── v0.4.3
Installed OpenBLAS_jll ──────────────── v0.3.7+5
Installed Arpack ────────────────────── v0.4.0
Installed StatsFuns ─────────────────── v0.9.3
Installed StatsBase ─────────────────── v0.32.0
Installed BinaryProvider ────────────── v0.5.8
Installed PDMats ────────────────────── v0.9.11
Installed Reexport ──────────────────── v0.2.0
Installed ShiftedArrays ─────────────── v1.0.0
Installed Tables ────────────────────── v0.2.11
Installed OrderedCollections ────────── v1.1.0
Installed StatsModels ───────────────── v0.6.7
Installed SpecialFunctions ──────────── v0.9.0
Installed DataStructures ────────────── v0.17.9
Installed DataValueInterfaces ───────── v1.0.0
Installed Distributions ─────────────── v0.22.4
#=#=# ######################################################################## 100.0%
#=#=# ######################################################################## 100.0%
#=#=# # 1.5%### 5.5%####### 9.8%########### 16.2%################# 23.9%######################### 34.8%############################### 43.2%########################################### 60.1%########################################################## 81.2%######################################################################## 100.0%
Updating `~/.julia/environments/v1.5/Project.toml`
[38e38edf] + GLM v1.3.6
Updating `~/.julia/environments/v1.5/Manifest.toml`
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+2
[b99e7846] + BinaryProvider v0.5.8
[9a962f9c] + DataAPI v1.1.0
[864edb3b] + DataStructures v0.17.9
[e2d170a0] + DataValueInterfaces v1.0.0
[31c24e10] + Distributions v0.22.4
[1a297f60] + FillArrays v0.8.4
[38e38edf] + GLM v1.3.6
[82899510] + IteratorInterfaceExtensions v1.0.0
[e1d29d7a] + Missings v0.4.3
[4536629a] + OpenBLAS_jll v0.3.7+5
[efe28fd5] + OpenSpecFun_jll v0.5.3+1
[bac558e1] + OrderedCollections v1.1.0
[90014a1f] + PDMats v0.9.11
[1fd47b50] + QuadGK v2.3.1
[189a3867] + Reexport v0.2.0
[79098fc4] + Rmath v0.6.0
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.9.0
[2913bbd2] + StatsBase v0.32.0
[4c63d2b9] + StatsFuns v0.9.3
[3eaba693] + StatsModels v0.6.7
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v0.2.11
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Rmath → `~/.julia/packages/Rmath/BoBag/deps/build.log`
Testing GLM
#=#=# ################################### 49.2%######################################################################## 100.0%
#=#=# ################# 24.6%######################################################################## 100.0%
#=#=# ###### 8.5%################### 26.8%################################## 47.6%####################################################### 77.0%######################################################################## 100.0%
Status `/tmp/jl_q0KTdE/Manifest.toml`
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+2
[b99e7846] BinaryProvider v0.5.8
[336ed68f] CSV v0.5.23
[324d7699] CategoricalArrays v0.7.7
[944b1d66] CodecZlib v0.6.0
[34da2185] Compat v3.2.0
[9a962f9c] DataAPI v1.1.0
[a93c6f00] DataFrames v0.20.0
[864edb3b] DataStructures v0.17.9
[e2d170a0] DataValueInterfaces v1.0.0
[31c24e10] Distributions v0.22.4
[e2ba6199] ExprTools v0.1.0
[8f5d6c58] EzXML v1.1.0
[5789e2e9] FileIO v1.2.1
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.4
[38e38edf] GLM v1.3.6
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.0
[94ce4f54] Libiconv_jll v1.16.0+1
[e1d29d7a] Missings v0.4.3
[78c3b35d] Mocking v0.7.1
[4536629a] OpenBLAS_jll v0.3.7+5
[efe28fd5] OpenSpecFun_jll v0.5.3+1
[bac558e1] OrderedCollections v1.1.0
[90014a1f] PDMats v0.9.11
[69de0a69] Parsers v0.3.11
[2dfb63ee] PooledArrays v0.5.3
[1fd47b50] QuadGK v2.3.1
[df47a6cb] RData v0.6.3
[ce6b1742] RDatasets v0.6.6
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.0
[79098fc4] Rmath v0.6.0
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.9.0
[2913bbd2] StatsBase v0.32.0
[4c63d2b9] StatsFuns v0.9.3
[3eaba693] StatsModels v0.6.7
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[f269a46b] TimeZones v1.0.0
[3bb67fe8] TranscodingStreams v0.9.5
[ea10d353] WeakRefStrings v0.6.2
[02c8fc9c] XML2_jll v2.9.9+1
[83775a58] Zlib_jll v1.2.11+8
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
ERROR: LoadError: LoadError: UndefVarError: @get! not defined
Stacktrace:
[1] include(::Module, ::String) at ./Base.jl:377
[2] include(::String) at /home/pkgeval/.julia/packages/Requires/hw5Ne/src/Requires.jl:1
[3] top-level scope at /home/pkgeval/.julia/packages/Requires/hw5Ne/src/Requires.jl:6
[4] include(::Module, ::String) at ./Base.jl:377
[5] top-level scope at none:2
[6] eval at ./boot.jl:331 [inlined]
[7] eval(::Expr) at ./client.jl:449
[8] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/Requires/hw5Ne/src/require.jl:1
in expression starting at /home/pkgeval/.julia/packages/Requires/hw5Ne/src/Requires.jl:6
ERROR: LoadError: LoadError: Failed to precompile Requires [ae029012-a4dd-5104-9daa-d747884805df] to /home/pkgeval/.julia/compiled/v1.5/Requires/IyxeS_4hmuC.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1270
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] include(::String) at /home/pkgeval/.julia/packages/RData/6wYre/src/RData.jl:1
[8] top-level scope at /home/pkgeval/.julia/packages/RData/6wYre/src/RData.jl:34
[9] include(::Module, ::String) at ./Base.jl:377
[10] top-level scope at none:2
[11] eval at ./boot.jl:331 [inlined]
[12] eval(::Expr) at ./client.jl:449
[13] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/RData/6wYre/src/decompression.jl:1
in expression starting at /home/pkgeval/.julia/packages/RData/6wYre/src/RData.jl:34
ERROR: LoadError: Failed to precompile RData [df47a6cb-8c03-5eed-afd8-b6050d6c41da] to /home/pkgeval/.julia/compiled/v1.5/RData/idMMA_4hmuC.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1270
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::Module, ::String) at ./Base.jl:377
[7] top-level scope at none:2
[8] eval at ./boot.jl:331 [inlined]
[9] eval(::Expr) at ./client.jl:449
[10] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/RDatasets/gHHSi/src/RDatasets.jl:2
ERROR: LoadError: Failed to precompile RDatasets [ce6b1742-4840-55fa-b093-852dadbb1d8b] to /home/pkgeval/.julia/compiled/v1.5/RDatasets/JyIbx_4hmuC.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1270
[3] _require(::Base.PkgId) at ./loading.jl:1029
[4] require(::Base.PkgId) at ./loading.jl:927
[5] require(::Module, ::Symbol) at ./loading.jl:922
[6] include(::String) at ./client.jl:439
[7] top-level scope at none:6
in expression starting at /home/pkgeval/.julia/packages/GLM/i5sYk/test/runtests.jl:1
ERROR: Package GLM errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String,N} where N) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:53
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1503
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:316
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:303
[5] #test#68 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:297 [inlined]
[7] #test#67 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:296 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:295
[11] top-level scope at none:13