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1.5.2-pre-be8475f41a.log
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Julia Version 1.5.2-pre.25
Commit be8475f41a (2020-09-09 06:41 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed FreeType2_jll ──────────────── v2.10.1+4
Installed Cairo_jll ──────────────────── v1.16.0+5
Installed WeakRefStrings ─────────────── v0.6.2
Installed Xorg_xtrans_jll ────────────── v1.4.0+2
Installed Fontconfig_jll ─────────────── v2.13.1+13
Installed Zlib_jll ───────────────────── v1.2.11+16
Installed LIBSVM ─────────────────────── v0.4.0
Installed PredictMD ──────────────────── v0.34.19
Installed Rmath ──────────────────────── v0.6.1
Installed SortingAlgorithms ──────────── v0.3.1
Installed DataDeps ───────────────────── v0.7.2
Installed Libgpg_error_jll ───────────── v1.36.0+2
Installed Libiconv_jll ───────────────── v1.16.0+6
Installed Combinatorics ──────────────── v1.0.2
Installed Libffi_jll ─────────────────── v3.2.1+3
Installed ROCAnalysis ────────────────── v0.3.1
Installed FillArrays ─────────────────── v0.8.14
Installed TikzPictures ───────────────── v3.3.0
Installed IterableTables ─────────────── v1.0.0
Installed GenericSchur ───────────────── v0.4.0
Installed CUDA ───────────────────────── v0.1.0
Installed Knet ───────────────────────── v1.3.7
Installed Documenter ─────────────────── v0.24.11
Installed Libgcrypt_jll ──────────────── v1.8.5+3
Installed Compat ─────────────────────── v3.15.0
Installed SpecialFunctions ───────────── v0.10.3
Installed LittleCMS_jll ──────────────── v2.9.0+0
Installed EzXML ──────────────────────── v1.1.0
Installed InvertedIndices ────────────── v1.0.0
Installed Tables ─────────────────────── v1.0.5
Installed NumericalIntegration ───────── v0.2.0
Installed XML2_jll ───────────────────── v2.9.10+2
Installed OpenBLAS_jll ───────────────── v0.3.10+0
Installed Libtiff_jll ────────────────── v4.1.0+1
Installed Adapt ──────────────────────── v1.1.0
Installed BSON ───────────────────────── v0.2.6
Installed Polynomials ────────────────── v1.1.7
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed JpegTurbo_jll ──────────────── v2.0.1+2
Installed ShiftedArrays ──────────────── v1.0.0
Installed ArgCheck ───────────────────── v2.1.0
Installed FileIO ─────────────────────── v1.4.3
Installed Xorg_libxcb_jll ────────────── v1.13.0+2
Installed Xorg_libXau_jll ────────────── v1.0.9+3
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed XSLT_jll ───────────────────── v1.1.33+3
Installed GZip ───────────────────────── v0.5.1
Installed TranscodingStreams ─────────── v0.9.5
Installed PGFPlotsX ──────────────────── v1.2.10
Installed TimeZones ──────────────────── v1.3.2
Installed Xorg_libXrender_jll ────────── v0.9.10+3
Installed TableTraits ────────────────── v1.0.0
Installed GenericSVD ─────────────────── v0.3.0
Installed Intervals ──────────────────── v1.4.2
Installed ClassImbalance ─────────────── v0.8.7
Installed TimerOutputs ───────────────── v0.5.6
Installed StatsModels ────────────────── v0.6.14
Installed Pixman_jll ─────────────────── v0.38.4+4
Installed FixedPointNumbers ──────────── v0.8.4
Installed Xorg_libpthread_stubs_jll ──── v0.1.0+2
Installed IteratorInterfaceExtensions ── v1.0.0
Installed Expat_jll ──────────────────── v2.2.7+5
Installed PDMats ─────────────────────── v0.9.12
Installed Nullables ──────────────────── v1.0.0
Installed Arpack_jll ─────────────────── v3.5.0+3
Installed JSON ───────────────────────── v0.21.1
Installed DecisionTree ───────────────── v0.10.9
Installed CategoricalArrays ──────────── v0.7.7
Installed ProgressMeter ──────────────── v1.3.2
Installed IntelOpenMP_jll ────────────── v2018.0.3+0
Installed MbedTLS_jll ────────────────── v2.16.8+0
Installed TextParse ──────────────────── v1.0.1
Installed IniFile ────────────────────── v0.5.0
Installed UnPack ─────────────────────── v1.0.2
Installed RecipesBase ────────────────── v1.0.2
Installed DataValueInterfaces ────────── v1.0.0
Installed HTTP ───────────────────────── v0.8.17
Installed LZO_jll ────────────────────── v2.10.0+2
Installed Gettext_jll ────────────────── v0.20.1+6
Installed AutoGrad ───────────────────── v1.2.3
Installed Parameters ─────────────────── v0.12.1
Installed PCRE_jll ───────────────────── v8.42.0+3
Installed StatsBase ──────────────────── v0.32.2
Installed GPUArrays ──────────────────── v3.4.1
Installed Mocking ────────────────────── v0.7.1
Installed MbedTLS ────────────────────── v1.0.2
Installed CSVFiles ───────────────────── v1.0.0
Installed DataValues ─────────────────── v0.4.13
Installed Glib_jll ───────────────────── v2.59.0+3
Installed AbstractFFTs ───────────────── v0.5.0
Installed DocumenterLaTeX ────────────── v0.2.0
Installed PredictMDAPI ───────────────── v0.3.1
Installed ValueHistories ─────────────── v0.5.3
Installed OrderedCollections ─────────── v1.3.0
Installed FFTW ───────────────────────── v1.2.4
Installed Literate ───────────────────── v2.6.0
Installed LLVM ───────────────────────── v1.7.0
Installed UnicodePlots ───────────────── v1.3.0
Installed DocumenterMarkdown ─────────── v0.2.0
Installed Xorg_libXext_jll ───────────── v1.3.4+3
Installed Arpack ─────────────────────── v0.4.0
Installed JLD2 ───────────────────────── v0.1.14
Installed DefaultApplication ─────────── v1.0.0
Installed Quadmath ───────────────────── v0.5.4
Installed StatsFuns ──────────────────── v0.9.5
Installed QuadGK ─────────────────────── v2.4.1
Installed MKL_jll ────────────────────── v2020.2.254+0
Installed Libuuid_jll ────────────────── v2.34.0+6
Installed Zstd_jll ───────────────────── v1.4.5+1
Installed ExprTools ──────────────────── v0.1.2
Installed IterTools ──────────────────── v1.3.0
Installed Reexport ───────────────────── v0.2.0
Installed FFTW_jll ───────────────────── v3.3.9+5
Installed DataFrames ─────────────────── v0.20.2
Installed Requires ───────────────────── v1.0.2
Installed DocStringExtensions ────────── v0.8.3
Installed GPUCompiler ────────────────── v0.3.0
Installed GLM ────────────────────────── v1.3.10
Installed FilePathsBase ──────────────── v0.7.0
Installed libpng_jll ─────────────────── v1.6.37+5
Installed PooledArrays ───────────────── v0.5.3
Installed DataAPI ────────────────────── v1.3.0
Installed TableTraitsUtils ───────────── v1.0.1
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed Parsers ────────────────────── v1.0.10
Installed Xorg_libX11_jll ────────────── v1.6.9+3
Installed Crayons ────────────────────── v4.0.4
Installed Xorg_libXdmcp_jll ──────────── v1.1.3+3
Installed Cassette ───────────────────── v0.3.3
Installed CodecZlib ──────────────────── v0.6.0
Installed LIBLINEAR ──────────────────── v0.5.1
Installed OffsetArrays ───────────────── v1.1.3
Installed CUDAapi ────────────────────── v4.0.0
Installed DoubleFloats ───────────────── v1.1.13
Installed NNlib ──────────────────────── v0.6.6
Installed MLBase ─────────────────────── v0.8.0
Installed OpenJpeg_jll ───────────────── v2.3.1+0
Installed LaTeXStrings ───────────────── v1.1.0
Installed ScikitLearnBase ────────────── v0.5.0
Installed MacroTools ─────────────────── v0.5.5
Installed CEnum ──────────────────────── v0.4.1
Installed Poppler_jll ────────────────── v0.87.0+0
Installed Missings ───────────────────── v0.4.4
Installed DataStructures ─────────────── v0.17.20
Installed Libmount_jll ───────────────── v2.34.0+2
Installed TableShowUtils ─────────────── v0.2.5
Installed BinaryProvider ─────────────── v0.5.10
Installed Bzip2_jll ──────────────────── v1.0.6+4
Installed RData ──────────────────────── v0.7.1
Installed Distributions ──────────────── v0.22.6
Installed CSV ────────────────────────── v0.6.1
Installed RDatasets ──────────────────── v0.6.10
Updating `~/.julia/environments/v1.5/Project.toml`
[3e7d7328] + PredictMD v0.34.19
Updating `~/.julia/environments/v1.5/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[79e6a3ab] + Adapt v1.1.0
[dce04be8] + ArgCheck v2.1.0
[7d9fca2a] + Arpack v0.4.0
[68821587] + Arpack_jll v3.5.0+3
[6710c13c] + AutoGrad v1.2.3
[fbb218c0] + BSON v0.2.6
[b99e7846] + BinaryProvider v0.5.10
[6e34b625] + Bzip2_jll v1.0.6+4
[fa961155] + CEnum v0.4.1
[336ed68f] + CSV v0.6.1
[5d742f6a] + CSVFiles v1.0.0
[052768ef] + CUDA v0.1.0
[3895d2a7] + CUDAapi v4.0.0
[83423d85] + Cairo_jll v1.16.0+5
[7057c7e9] + Cassette v0.3.3
[324d7699] + CategoricalArrays v0.7.7
[04a18a73] + ClassImbalance v0.8.7
[944b1d66] + CodecZlib v0.6.0
[861a8166] + Combinatorics v1.0.2
[34da2185] + Compat v3.15.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[a8cc5b0e] + Crayons v4.0.4
[9a962f9c] + DataAPI v1.3.0
[124859b0] + DataDeps v0.7.2
[a93c6f00] + DataFrames v0.20.2
[864edb3b] + DataStructures v0.17.20
[e2d170a0] + DataValueInterfaces v1.0.0
[e7dc6d0d] + DataValues v0.4.13
[7806a523] + DecisionTree v0.10.9
[3f0dd361] + DefaultApplication v1.0.0
[31c24e10] + Distributions v0.22.6
[ffbed154] + DocStringExtensions v0.8.3
[e30172f5] + Documenter v0.24.11
[cd674d7a] + DocumenterLaTeX v0.2.0
[997ab1e6] + DocumenterMarkdown v0.2.0
[497a8b3b] + DoubleFloats v1.1.13
[2e619515] + Expat_jll v2.2.7+5
[e2ba6199] + ExprTools v0.1.2
[8f5d6c58] + EzXML v1.1.0
[7a1cc6ca] + FFTW v1.2.4
[f5851436] + FFTW_jll v3.3.9+5
[5789e2e9] + FileIO v1.4.3
[48062228] + FilePathsBase v0.7.0
[1a297f60] + FillArrays v0.8.14
[53c48c17] + FixedPointNumbers v0.8.4
[a3f928ae] + Fontconfig_jll v2.13.1+13
[d7e528f0] + FreeType2_jll v2.10.1+4
[38e38edf] + GLM v1.3.10
[0c68f7d7] + GPUArrays v3.4.1
[61eb1bfa] + GPUCompiler v0.3.0
[92fee26a] + GZip v0.5.1
[01680d73] + GenericSVD v0.3.0
[c145ed77] + GenericSchur v0.4.0
[78b55507] + Gettext_jll v0.20.1+6
[7746bdde] + Glib_jll v2.59.0+3
[cd3eb016] + HTTP v0.8.17
[83e8ac13] + IniFile v0.5.0
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[d8418881] + Intervals v1.4.2
[41ab1584] + InvertedIndices v1.0.0
[c8e1da08] + IterTools v1.3.0
[1c8ee90f] + IterableTables v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[033835bb] + JLD2 v0.1.14
[682c06a0] + JSON v0.21.1
[aacddb02] + JpegTurbo_jll v2.0.1+2
[1902f260] + Knet v1.3.7
[2d691ee1] + LIBLINEAR v0.5.1
[b1bec4e5] + LIBSVM v0.4.0
[929cbde3] + LLVM v1.7.0
[dd4b983a] + LZO_jll v2.10.0+2
[b964fa9f] + LaTeXStrings v1.1.0
[e9f186c6] + Libffi_jll v3.2.1+3
[d4300ac3] + Libgcrypt_jll v1.8.5+3
[7add5ba3] + Libgpg_error_jll v1.36.0+2
[94ce4f54] + Libiconv_jll v1.16.0+6
[4b2f31a3] + Libmount_jll v2.34.0+2
[89763e89] + Libtiff_jll v4.1.0+1
[38a345b3] + Libuuid_jll v2.34.0+6
[98b081ad] + Literate v2.6.0
[d3a379c0] + LittleCMS_jll v2.9.0+0
[856f044c] + MKL_jll v2020.2.254+0
[f0e99cf1] + MLBase v0.8.0
[1914dd2f] + MacroTools v0.5.5
[739be429] + MbedTLS v1.0.2
[c8ffd9c3] + MbedTLS_jll v2.16.8+0
[e1d29d7a] + Missings v0.4.4
[78c3b35d] + Mocking v0.7.1
[872c559c] + NNlib v0.6.6
[4d1e1d77] + Nullables v1.0.0
[e7bfaba1] + NumericalIntegration v0.2.0
[6fe1bfb0] + OffsetArrays v1.1.3
[4536629a] + OpenBLAS_jll v0.3.10+0
[643b3616] + OpenJpeg_jll v2.3.1+0
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.3.0
[2f80f16e] + PCRE_jll v8.42.0+3
[90014a1f] + PDMats v0.9.12
[8314cec4] + PGFPlotsX v1.2.10
[d96e819e] + Parameters v0.12.1
[69de0a69] + Parsers v1.0.10
[30392449] + Pixman_jll v0.38.4+4
[f27b6e38] + Polynomials v1.1.7
[2dfb63ee] + PooledArrays v0.5.3
[9c32591e] + Poppler_jll v0.87.0+0
[3e7d7328] + PredictMD v0.34.19
[df4d2c64] + PredictMDAPI v0.3.1
[92933f4c] + ProgressMeter v1.3.2
[1fd47b50] + QuadGK v2.4.1
[be4d8f0f] + Quadmath v0.5.4
[df47a6cb] + RData v0.7.1
[ce6b1742] + RDatasets v0.6.10
[f535d66d] + ROCAnalysis v0.3.1
[3cdcf5f2] + RecipesBase v1.0.2
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.0.2
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[6e75b9c4] + ScikitLearnBase v0.5.0
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[2913bbd2] + StatsBase v0.32.2
[4c63d2b9] + StatsFuns v0.9.5
[3eaba693] + StatsModels v0.6.14
[5e66a065] + TableShowUtils v0.2.5
[3783bdb8] + TableTraits v1.0.0
[382cd787] + TableTraitsUtils v1.0.1
[bd369af6] + Tables v1.0.5
[e0df1984] + TextParse v1.0.1
[37f6aa50] + TikzPictures v3.3.0
[f269a46b] + TimeZones v1.3.2
[a759f4b9] + TimerOutputs v0.5.6
[3bb67fe8] + TranscodingStreams v0.9.5
[3a884ed6] + UnPack v1.0.2
[b8865327] + UnicodePlots v1.3.0
[98cad3c8] + ValueHistories v0.5.3
[ea10d353] + WeakRefStrings v0.6.2
[02c8fc9c] + XML2_jll v2.9.10+2
[aed1982a] + XSLT_jll v1.1.33+3
[4f6342f7] + Xorg_libX11_jll v1.6.9+3
[0c0b7dd1] + Xorg_libXau_jll v1.0.9+3
[a3789734] + Xorg_libXdmcp_jll v1.1.3+3
[1082639a] + Xorg_libXext_jll v1.3.4+3
[ea2f1a96] + Xorg_libXrender_jll v0.9.10+3
[14d82f49] + Xorg_libpthread_stubs_jll v0.1.0+2
[c7cfdc94] + Xorg_libxcb_jll v1.13.0+2
[c5fb5394] + Xorg_xtrans_jll v1.4.0+2
[83775a58] + Zlib_jll v1.2.11+16
[3161d3a3] + Zstd_jll v1.4.5+1
[b53b4c65] + libpng_jll v1.6.37+5
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building LIBLINEAR → `~/.julia/packages/LIBLINEAR/yTdp5/deps/build.log`
Building LIBSVM ───→ `~/.julia/packages/LIBSVM/5Z99T/deps/build.log`
Building NNlib ────→ `~/.julia/packages/NNlib/FAI3o/deps/build.log`
Building CodecZlib → `~/.julia/packages/CodecZlib/5t9zO/deps/build.log`
Building Knet ─────→ `~/.julia/packages/Knet/V526D/deps/build.log`
┌ Error: Error building `Knet`:
│ ERROR: LoadError: LoadError: LoadError: UndefVarError: AddrSpacePtr not defined
│ Stacktrace:
│ [1] getproperty(::Module, ::Symbol) at ./Base.jl:26
│ [2] top-level scope at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda/wmma.jl:52
│ [3] include(::Function, ::Module, ::String) at ./Base.jl:380
│ [4] include at ./Base.jl:368 [inlined]
│ [5] include(::String) at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:1
│ [6] top-level scope at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda.jl:15
│ [7] include(::Function, ::Module, ::String) at ./Base.jl:380
│ [8] include at ./Base.jl:368 [inlined]
│ [9] include(::String) at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:1
│ [10] top-level scope at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:39
│ [11] include(::Function, ::Module, ::String) at ./Base.jl:380
│ [12] include(::Module, ::String) at ./Base.jl:368
│ [13] top-level scope at none:2
│ [14] eval at ./boot.jl:331 [inlined]
│ [15] eval(::Expr) at ./client.jl:467
│ [16] top-level scope at ./none:3
│ in expression starting at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda/wmma.jl:52
│ in expression starting at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda.jl:14
│ in expression starting at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:39
│ ERROR: LoadError: Failed to precompile CUDA [052768ef-5323-5732-b1bb-66c8b64840ba] to /home/pkgeval/.julia/compiled/v1.5/CUDA/oWw5k_CvVwL.ji.
│ Stacktrace:
│ [1] error(::String) at ./error.jl:33
│ [2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1305
│ [3] _require(::Base.PkgId) at ./loading.jl:1030
│ [4] require(::Base.PkgId) at ./loading.jl:928
│ [5] require(::Module, ::Symbol) at ./loading.jl:923
│ [6] include(::String) at ./client.jl:457
│ [7] top-level scope at none:5
│ in expression starting at /home/pkgeval/.julia/packages/Knet/V526D/deps/build.jl:1
└ @ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:949
Building TimeZones → `~/.julia/packages/TimeZones/v0mfN/deps/build.log`
Building FFTW ─────→ `~/.julia/packages/FFTW/DMUbN/deps/build.log`
Testing PredictMD
┌ Error: Pkg.Resolve.ResolverError("Unsatisfiable requirements detected for package GaussianProcesses [891a1506]:\n GaussianProcesses [891a1506] log:\n ├─possible versions are: [0.8.0, 0.9.0, 0.10.0, 0.11.0-0.11.2, 0.12.0-0.12.1] or uninstalled\n ├─restricted by compatibility requirements with RecipesBase [3cdcf5f2] to versions: 0.12.0-0.12.1 or uninstalled\n │ └─RecipesBase [3cdcf5f2] log:\n │ ├─possible versions are: [0.4.0, 0.5.0, 0.6.0, 0.7.0, 0.8.0, 1.0.0-1.0.2] or uninstalled\n │ └─restricted to versions 1.0.2 by an explicit requirement, leaving only versions 1.0.2\n └─restricted by compatibility requirements with PredictMDExtra [d14d998a] to versions: [0.8.0, 0.9.0, 0.10.0, 0.11.0-0.11.2] — no versions left\n └─PredictMDExtra [d14d998a] log:\n ├─possible versions are: [0.7.0, 0.8.0, 0.9.0, 0.10.0, 0.11.0-0.11.2, 0.12.0-0.12.1, 0.13.0-0.13.17] or uninstalled\n ├─restricted to versions * by an explicit requirement, leaving only versions [0.7.0, 0.8.0, 0.9.0, 0.10.0, 0.11.0-0.11.2, 0.12.0-0.12.1, 0.13.0-0.13.17]\n ├─restricted by compatibility requirements with CSVFiles [5d742f6a] to versions: [0.10.0, 0.11.0-0.11.2, 0.12.0-0.12.1, 0.13.0-0.13.17] or uninstalled, leaving only versions: [0.10.0, 0.11.0-0.11.2, 0.12.0-0.12.1, 0.13.0-0.13.17]\n │ └─CSVFiles [5d742f6a] log:\n │ ├─possible versions are: [0.9.0-0.9.1, 0.10.0, 0.11.0, 0.12.0, 0.13.0, 0.14.0, 0.15.0, 0.16.0-0.16.1, 1.0.0] or uninstalled\n │ └─restricted to versions 1.0.0 by an explicit requirement, leaving only versions 1.0.0\n ├─restricted by compatibility requirements with Rmath [79098fc4] to versions: [0.7.0, 0.8.0, 0.9.0, 0.10.0, 0.13.1-0.13.17] or uninstalled, leaving only versions: [0.10.0, 0.13.1-0.13.17]\n │ └─Rmath [79098fc4] log:\n │ ├─possible versions are: [0.5.0-0.5.1, 0.6.0-0.6.1] or uninstalled\n │ └─restricted to versions 0.6.1 by an explicit requirement, leaving only versions 0.6.1\n └─restricted by compatibility requirements with DeIdentification [b905b068] to versions: [0.7.0, 0.8.0, 0.9.0, 0.10.0] or uninstalled, leaving only versions: 0.10.0\n └─DeIdentification [b905b068] log:\n ├─possible versions are: [0.0.2, 0.1.0-0.1.1, 0.2.0-0.2.1, 0.3.0, 0.4.0, 0.5.0-0.5.1, 0.6.0-0.6.2, 0.7.0, 0.8.0-0.8.1] or uninstalled\n └─restricted by compatibility requirements with CSV [336ed68f] to versions: uninstalled\n └─CSV [336ed68f] log:\n ├─possible versions are: [0.3.0-0.3.1, 0.4.0-0.4.3, 0.5.0-0.5.26, 0.6.0-0.6.2, 0.7.0-0.7.7] or uninstalled\n └─restricted to versions 0.6.1 by an explicit requirement, leaving only versions 0.6.1", nothing)
└ @ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1427
Status `/tmp/jl_1S5zye/Project.toml`
[79e6a3ab] Adapt v1.1.0
[fbb218c0] BSON v0.2.6
[5d742f6a] CSVFiles v1.0.0
[3895d2a7] CUDAapi v4.0.0
[7057c7e9] Cassette v0.3.3
[324d7699] CategoricalArrays v0.7.7
[04a18a73] ClassImbalance v0.8.1
[861a8166] Combinatorics v1.0.2
[124859b0] DataDeps v0.7.2
[a93c6f00] DataFrames v0.20.0
[7806a523] DecisionTree v0.10.9
[3f0dd361] DefaultApplication v1.0.0
[31c24e10] Distributions v0.21.12
[e30172f5] Documenter v0.24.11
[cd674d7a] DocumenterLaTeX v0.2.0
[997ab1e6] DocumenterMarkdown v0.2.0
[7a1cc6ca] FFTW v1.2.4
[5789e2e9] FileIO v1.4.3
[53c48c17] FixedPointNumbers v0.7.1
[38e38edf] GLM v1.3.10
[92fee26a] GZip v0.5.1
[cd3eb016] HTTP v0.8.17
[c8e1da08] IterTools v1.3.0
[1c8ee90f] IterableTables v1.0.0
[033835bb] JLD2 v0.1.14
[1902f260] Knet v1.3.7
[b1bec4e5] LIBSVM v0.4.0
[b964fa9f] LaTeXStrings v1.1.0
[98b081ad] Literate v2.6.0
[f0e99cf1] MLBase v0.8.0
[1914dd2f] MacroTools v0.5.5
[e7bfaba1] NumericalIntegration v0.2.0
[8314cec4] PGFPlotsX v1.2.9
[3e7d7328] PredictMD v0.34.19
[df4d2c64] PredictMDAPI v0.3.1
[d14d998a] PredictMDExtra v0.13.15
[92933f4c] ProgressMeter v1.3.2
[df47a6cb] RData v0.7.1
[ce6b1742] RDatasets v0.6.10
[f535d66d] ROCAnalysis v0.3.1
[ae029012] Requires v1.0.2
[321657f4] ScientificTypes v0.5.1
[2913bbd2] StatsBase v0.32.2
[3eaba693] StatsModels v0.6.14
[37f6aa50] TikzPictures v3.3.0
[b8865327] UnicodePlots v1.3.0
[1986cc42] Unitful v1.4.0
[98cad3c8] ValueHistories v0.5.3
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[37e2e46d] LinearAlgebra
[44cfe95a] Pkg
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_1S5zye/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[1520ce14] AbstractTrees v0.3.3
[79e6a3ab] Adapt v1.1.0
[dce04be8] ArgCheck v2.1.0
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+3
[6710c13c] AutoGrad v1.2.3
[fbb218c0] BSON v0.2.6
[6e4b80f9] BenchmarkTools v0.4.3
[9e28174c] BinDeps v1.0.1
[b99e7846] BinaryProvider v0.5.10
[6e34b625] Bzip2_jll v1.0.6+4
[fa961155] CEnum v0.2.0
[336ed68f] CSV v0.5.23
[5d742f6a] CSVFiles v1.0.0
[052768ef] CUDA v0.1.0
[3895d2a7] CUDAapi v4.0.0
[83423d85] Cairo_jll v1.16.0+5
[7057c7e9] Cassette v0.3.3
[324d7699] CategoricalArrays v0.7.7
[04a18a73] ClassImbalance v0.8.1
[aaaa29a8] Clustering v0.14.1
[944b1d66] CodecZlib v0.6.0
[3da002f7] ColorTypes v0.8.1
[861a8166] Combinatorics v1.0.2
[34da2185] Compat v2.2.1
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[ed09eef8] ComputationalResources v0.3.2
[187b0558] ConstructionBase v1.0.0
[a2441757] Coverage v1.1.1
[c36e975a] CoverageTools v1.1.0
[a8cc5b0e] Crayons v4.0.4
[9a962f9c] DataAPI v1.3.0
[124859b0] DataDeps v0.7.2
[a93c6f00] DataFrames v0.20.0
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[e7dc6d0d] DataValues v0.4.13
[b905b068] DeIdentification v0.8.1
[7806a523] DecisionTree v0.10.9
[3f0dd361] DefaultApplication v1.0.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.12
[ffbed154] DocStringExtensions v0.8.3
[e30172f5] Documenter v0.24.11
[cd674d7a] DocumenterLaTeX v0.2.0
[997ab1e6] DocumenterMarkdown v0.2.0
[497a8b3b] DoubleFloats v1.1.13
[2e619515] Expat_jll v2.2.7+5
[e2ba6199] ExprTools v0.1.2
[8f5d6c58] EzXML v1.1.0
[7a1cc6ca] FFTW v1.2.4
[f5851436] FFTW_jll v3.3.9+5
[5789e2e9] FileIO v1.4.3
[48062228] FilePathsBase v0.7.0
[1a297f60] FillArrays v0.8.14
[53c48c17] FixedPointNumbers v0.7.1
[a3f928ae] Fontconfig_jll v2.13.1+13
[59287772] Formatting v0.4.1
[d7e528f0] FreeType2_jll v2.10.1+4
[38e38edf] GLM v1.3.10
[0c68f7d7] GPUArrays v3.4.1
[61eb1bfa] GPUCompiler v0.3.0
[92fee26a] GZip v0.5.1
[01680d73] GenericSVD v0.3.0
[c145ed77] GenericSchur v0.4.0
[78b55507] Gettext_jll v0.20.1+6
[7746bdde] Glib_jll v2.59.0+3
[c27321d9] Glob v1.3.0
[cd3eb016] HTTP v0.8.17
[83e8ac13] IniFile v0.5.0
[1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
[d8418881] Intervals v1.4.2
[41ab1584] InvertedIndices v1.0.0
[c8e1da08] IterTools v1.3.0
[1c8ee90f] IterableTables v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[033835bb] JLD2 v0.1.14
[682c06a0] JSON v0.21.1
[aacddb02] JpegTurbo_jll v2.0.1+2
[1902f260] Knet v1.3.7
[2d691ee1] LIBLINEAR v0.5.1
[b1bec4e5] LIBSVM v0.4.0
[929cbde3] LLVM v1.7.0
[dd4b983a] LZO_jll v2.10.0+2
[b964fa9f] LaTeXStrings v1.1.0
[7f8f8fb0] LearnBase v0.2.2
[1d6d02ad] LeftChildRightSiblingTrees v0.1.2
[e9f186c6] Libffi_jll v3.2.1+3
[d4300ac3] Libgcrypt_jll v1.8.5+3
[7add5ba3] Libgpg_error_jll v1.36.0+2
[94ce4f54] Libiconv_jll v1.16.0+6
[4b2f31a3] Libmount_jll v2.34.0+2
[89763e89] Libtiff_jll v4.1.0+1
[38a345b3] Libuuid_jll v2.34.0+6
[98b081ad] Literate v2.6.0
[d3a379c0] LittleCMS_jll v2.9.0+0
[30fc2ffe] LossFunctions v0.5.1
[856f044c] MKL_jll v2020.2.254+0
[f0e99cf1] MLBase v0.8.0
[add582a8] MLJ v0.8.0
[a7f614a8] MLJBase v0.10.1
[d491faf4] MLJModels v0.7.2
[03970b2e] MLJTuning v0.1.2
[1914dd2f] MacroTools v0.5.5
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.8+0
[f9f48841] MemPool v0.2.0
[f28f55f0] Memento v0.12.1
[e1d29d7a] Missings v0.4.4
[78c3b35d] Mocking v0.7.1
[6f286f6a] MultivariateStats v0.7.0
[872c559c] NNlib v0.6.6
[b8a86587] NearestNeighbors v0.4.4
[4d1e1d77] Nullables v1.0.0
[e7bfaba1] NumericalIntegration v0.2.0
[6fe1bfb0] OffsetArrays v1.1.3
[4536629a] OpenBLAS_jll v0.3.10+0
[643b3616] OpenJpeg_jll v2.3.1+0
[bac558e1] OrderedCollections v1.3.0
[2f80f16e] PCRE_jll v8.42.0+3
[90014a1f] PDMats v0.9.12
[8314cec4] PGFPlotsX v1.2.9
[d96e819e] Parameters v0.12.1
[69de0a69] Parsers v0.3.12
[30392449] Pixman_jll v0.38.4+4
[32113eaa] PkgBenchmark v0.2.10
[f27b6e38] Polynomials v1.1.7
[2dfb63ee] PooledArrays v0.5.3
[9c32591e] Poppler_jll v0.87.0+0
[3e7d7328] PredictMD v0.34.19
[df4d2c64] PredictMDAPI v0.3.1
[d14d998a] PredictMDExtra v0.13.15
[08abe8d2] PrettyTables v0.6.0
[33c8b6b6] ProgressLogging v0.1.3
[92933f4c] ProgressMeter v1.3.2
[1fd47b50] QuadGK v2.4.1
[be4d8f0f] Quadmath v0.5.4
[df47a6cb] RData v0.7.1
[ce6b1742] RDatasets v0.6.10
[f535d66d] ROCAnalysis v0.3.1
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[cbe49d4c] RemoteFiles v0.3.1
[ae029012] Requires v1.0.2
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[321657f4] ScientificTypes v0.5.1
[6e75b9c4] ScikitLearnBase v0.5.0
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.8.0
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.32.2
[4c63d2b9] StatsFuns v0.9.5
[3eaba693] StatsModels v0.6.14
[cea106d9] Syslogs v0.3.0
[5e66a065] TableShowUtils v0.2.5
[3783bdb8] TableTraits v1.0.0
[382cd787] TableTraitsUtils v1.0.1
[bd369af6] Tables v0.2.11
[5d786b92] TerminalLoggers v0.1.2
[e0df1984] TextParse v1.0.1
[37f6aa50] TikzPictures v3.3.0
[f269a46b] TimeZones v1.3.2
[a759f4b9] TimerOutputs v0.5.6
[3bb67fe8] TranscodingStreams v0.9.5
[30578b45] URIParser v0.4.1
[3a884ed6] UnPack v1.0.2
[b8865327] UnicodePlots v1.3.0
[1986cc42] Unitful v1.4.0
[98cad3c8] ValueHistories v0.5.3
[ea10d353] WeakRefStrings v0.6.2
[02c8fc9c] XML2_jll v2.9.10+2
[aed1982a] XSLT_jll v1.1.33+3
[4f6342f7] Xorg_libX11_jll v1.6.9+3
[0c0b7dd1] Xorg_libXau_jll v1.0.9+3
[a3789734] Xorg_libXdmcp_jll v1.1.3+3
[1082639a] Xorg_libXext_jll v1.3.4+3
[ea2f1a96] Xorg_libXrender_jll v0.9.10+3
[14d82f49] Xorg_libpthread_stubs_jll v0.1.0+2
[c7cfdc94] Xorg_libxcb_jll v1.13.0+2
[c5fb5394] Xorg_xtrans_jll v1.4.0+2
[ddb6d928] YAML v0.4.2
[83775a58] Zlib_jll v1.2.11+16
[3161d3a3] Zstd_jll v1.4.5+1
[b53b4c65] libpng_jll v1.6.37+5
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
[ Info: Model metadata loaded from registry.
Resolving package versions...
Updating `/tmp/jl_1S5zye/Project.toml`
[6e4b80f9] + BenchmarkTools v0.4.3
No Changes to `/tmp/jl_1S5zye/Manifest.toml`
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Updating `/tmp/jl_1S5zye/Project.toml`
[aaaa29a8] + Clustering v0.14.1
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Updating `/tmp/jl_1S5zye/Project.toml`
[a2441757] + Coverage v1.1.1
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[ade2ca70] + Dates
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[b905b068] + DeIdentification v0.8.1
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[b4f34e82] + Distances v0.8.2
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[add582a8] + MLJ v0.8.0
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[a7f614a8] + MLJBase v0.10.1
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[d491faf4] + MLJModels v0.7.2
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[f9f48841] + MemPool v0.2.0
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[6f286f6a] + MultivariateStats v0.7.0
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Updating `/tmp/jl_1S5zye/Project.toml`
[32113eaa] + PkgBenchmark v0.2.10
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Updating `/tmp/jl_1S5zye/Project.toml`
[cbe49d4c] + RemoteFiles v0.3.1
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[79098fc4] + Rmath v0.6.1
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[a759f4b9] + TimerOutputs v0.5.6
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ERROR: LoadError: LoadError: LoadError: UndefVarError: AddrSpacePtr not defined
Stacktrace:
[1] getproperty(::Module, ::Symbol) at ./Base.jl:26
[2] top-level scope at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda/wmma.jl:52
[3] include(::Function, ::Module, ::String) at ./Base.jl:380
[4] include at ./Base.jl:368 [inlined]
[5] include(::String) at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:1
[6] top-level scope at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda.jl:15
[7] include(::Function, ::Module, ::String) at ./Base.jl:380
[8] include at ./Base.jl:368 [inlined]
[9] include(::String) at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:1
[10] top-level scope at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:39
[11] include(::Function, ::Module, ::String) at ./Base.jl:380
[12] include(::Module, ::String) at ./Base.jl:368
[13] top-level scope at none:2
[14] eval at ./boot.jl:331 [inlined]
[15] eval(::Expr) at ./client.jl:467
[16] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda/wmma.jl:52
in expression starting at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/device/cuda.jl:14
in expression starting at /home/pkgeval/.julia/packages/CUDA/5t6R9/src/CUDA.jl:39
ERROR: LoadError: LoadError: Failed to precompile CUDA [052768ef-5323-5732-b1bb-66c8b64840ba] to /home/pkgeval/.julia/compiled/v1.5/CUDA/oWw5k_98nrr.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1305
[3] _require(::Base.PkgId) at ./loading.jl:1030
[4] require(::Base.PkgId) at ./loading.jl:928
[5] require(::Module, ::Symbol) at ./loading.jl:923
[6] include(::Function, ::Module, ::String) at ./Base.jl:380
[7] include at ./Base.jl:368 [inlined]
[8] include(::String) at /home/pkgeval/.julia/packages/Knet/V526D/src/Knet.jl:1
[9] top-level scope at /home/pkgeval/.julia/packages/Knet/V526D/src/Knet.jl:112
[10] include(::Function, ::Module, ::String) at ./Base.jl:380
[11] include(::Module, ::String) at ./Base.jl:368
[12] top-level scope at none:2
[13] eval at ./boot.jl:331 [inlined]
[14] eval(::Expr) at ./client.jl:467
[15] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/Knet/V526D/src/gpu.jl:1
in expression starting at /home/pkgeval/.julia/packages/Knet/V526D/src/Knet.jl:112
ERROR: LoadError: LoadError: Failed to precompile Knet [1902f260-5fb4-5aff-8c31-6271790ab950] to /home/pkgeval/.julia/compiled/v1.5/Knet/f4vSz_98nrr.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1305
[3] _require(::Base.PkgId) at ./loading.jl:1030
[4] require(::Base.PkgId) at ./loading.jl:928
[5] require(::Module, ::Symbol) at ./loading.jl:923
[6] include(::Function, ::Module, ::String) at ./Base.jl:380
[7] include at ./Base.jl:368 [inlined]
[8] include(::String) at /home/pkgeval/.julia/packages/PredictMD/twTqU/src/PredictMD.jl:5
[9] top-level scope at /home/pkgeval/.julia/packages/PredictMD/twTqU/src/PredictMD.jl:67
[10] include(::Function, ::Module, ::String) at ./Base.jl:380
[11] include(::Module, ::String) at ./Base.jl:368
[12] top-level scope at none:2
[13] eval at ./boot.jl:331 [inlined]
[14] eval(::Expr) at ./client.jl:467
[15] top-level scope at ./none:3
in expression starting at /home/pkgeval/.julia/packages/PredictMD/twTqU/src/toplevel/always-loaded/neuralnetwork/knet.jl:3
in expression starting at /home/pkgeval/.julia/packages/PredictMD/twTqU/src/PredictMD.jl:67
PredictMD.jl: Error During Test at /home/pkgeval/.julia/packages/PredictMD/twTqU/test/runtests.jl:5
Got exception outside of a @test
LoadError: Failed to precompile PredictMD [3e7d7328-36f8-4388-bd01-4613c92c7370] to /home/pkgeval/.julia/compiled/v1.5/PredictMD/I8XNq_98nrr.ji.
Stacktrace:
[1] error(::String) at ./error.jl:33
[2] compilecache(::Base.PkgId, ::String) at ./loading.jl:1305
[3] _require(::Base.PkgId) at ./loading.jl:1030
[4] require(::Base.PkgId) at ./loading.jl:928
[5] require(::Module, ::Symbol) at ./loading.jl:923
[6] include(::String) at ./client.jl:457
[7] top-level scope at /home/pkgeval/.julia/packages/PredictMD/twTqU/test/runtests.jl:10
[8] top-level scope at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Test/src/Test.jl:1115
[9] top-level scope at /home/pkgeval/.julia/packages/PredictMD/twTqU/test/runtests.jl:6
[10] include(::String) at ./client.jl:457
[11] top-level scope at none:6
[12] eval(::Module, ::Any) at ./boot.jl:331
[13] exec_options(::Base.JLOptions) at ./client.jl:272
[14] _start() at ./client.jl:506
in expression starting at /home/pkgeval/.julia/packages/PredictMD/twTqU/test/import-predictmd.jl:15
Test Summary: | Error Total
PredictMD.jl | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/PredictMD/twTqU/test/runtests.jl:5
ERROR: Package PredictMD errored during testing
Stacktrace:
[1] pkgerror(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Types.jl:52
[2] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/Operations.jl:1578
[3] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:328
[4] test(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:315
[5] #test#61 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:67 [inlined]
[6] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:67 [inlined]
[7] #test#60 at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:66 [inlined]
[8] test at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:66 [inlined]
[9] test(::String; kwargs::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:65
[10] test(::String) at /workspace/srcdir/usr/share/julia/stdlib/v1.5/Pkg/src/API.jl:65
[11] top-level scope at none:19