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1.6.0-DEV-36effbe10a.log
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Julia Version 1.6.0-DEV.1117
Commit 36effbe10a (2020-10-02 17:38 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed ModelSanitizer ─ v0.3.0
Updating `~/.julia/environments/v1.6/Project.toml`
[913cd07a] + ModelSanitizer v0.3.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[913cd07a] + ModelSanitizer v0.3.0
Testing ModelSanitizer
Status `/tmp/jl_2nJc60/Project.toml`
[6e4b80f9] BenchmarkTools v0.4.3
[a2441757] Coverage v0.9.3
[a93c6f00] DataFrames v0.18.4
[add582a8] MLJ v0.2.5
[a7f614a8] MLJBase v0.2.3
[d491faf4] MLJModels v0.2.5
[913cd07a] ModelSanitizer v0.3.0
[6f286f6a] MultivariateStats v0.6.0
[32113eaa] PkgBenchmark v0.2.10
[2913bbd2] StatsBase v0.31.0
[3eaba693] StatsModels v0.6.2
[a759f4b9] TimerOutputs v0.5.6
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_2nJc60/Manifest.toml`
[1520ce14] AbstractTrees v0.3.3
[7d9fca2a] Arpack v0.4.0
[68821587] Arpack_jll v3.5.0+3
[6e4b80f9] BenchmarkTools v0.4.3
[9e28174c] BinDeps v0.8.10
[b99e7846] BinaryProvider v0.5.10
[336ed68f] CSV v0.5.23
[324d7699] CategoricalArrays v0.5.2
[34da2185] Compat v2.2.1
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[a2441757] Coverage v0.9.3
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.18.4
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[b4f34e82] Distances v0.8.2
[31c24e10] Distributions v0.21.0
[5789e2e9] FileIO v1.4.3
[48062228] FilePathsBase v0.7.0
[cd3eb016] HTTP v0.8.19
[83e8ac13] IniFile v0.5.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[2d691ee1] LIBLINEAR v0.5.1
[b1bec4e5] LIBSVM v0.4.0
[1d6d02ad] LeftChildRightSiblingTrees v0.1.2
[add582a8] MLJ v0.2.5
[a7f614a8] MLJBase v0.2.3
[d491faf4] MLJModels v0.2.5
[739be429] MbedTLS v0.7.0
[e1d29d7a] Missings v0.4.4
[913cd07a] ModelSanitizer v0.3.0
[6f286f6a] MultivariateStats v0.6.0
[4536629a] OpenBLAS_jll v0.3.10+0
[bac558e1] OrderedCollections v1.3.1
[90014a1f] PDMats v0.9.12
[69de0a69] Parsers v0.3.12
[32113eaa] PkgBenchmark v0.2.10
[2dfb63ee] PooledArrays v0.5.3
[33c8b6b6] ProgressLogging v0.1.3
[92933f4c] ProgressMeter v1.4.0
[1fd47b50] QuadGK v2.4.1
[3cdcf5f2] RecipesBase v0.7.0
[189a3867] Reexport v0.2.0
[cbe49d4c] RemoteFiles v0.3.1
[ae029012] Requires v0.5.2
[79098fc4] Rmath v0.5.1
[6e75b9c4] ScikitLearnBase v0.5.0
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.7.2
[2913bbd2] StatsBase v0.31.0
[4c63d2b9] StatsFuns v0.8.0
[3eaba693] StatsModels v0.6.2
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v0.2.11
[5d786b92] TerminalLoggers v0.1.2
[a759f4b9] TimerOutputs v0.5.6
[30578b45] URIParser v0.4.1
[ea10d353] WeakRefStrings v0.6.2
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
┌ Warning: `@get!(dict, key, default)` at /home/pkgeval/.julia/packages/ModelSanitizer/fYC4k/ext/Requires/src/require.jl:11 is deprecated, use `get!(()->default, dict, key)` instead.
└ @ Base deprecated.jl:204
┌ Warning: `@get!(dict, key, default)` at /home/pkgeval/.julia/packages/Requires/9Jse8/src/require.jl:11 is deprecated, use `get!(()->default, dict, key)` instead.
└ @ Base deprecated.jl:204
Test Summary: | Pass Total
Unit tests | 118 118
mse(m, X[training_rows, :], y[training_rows]) = 1.0203763775483616
rmse(m, X[training_rows, :], y[training_rows]) = 1.0101368113024898
r2(m, X[training_rows, :], y[training_rows]) = 0.9264749827714345
mse(m, X[testing_rows, :], y[testing_rows]) = 1.0383932128691888
rmse(m, X[testing_rows, :], y[testing_rows]) = 1.0190158059957601
r2(m, X[testing_rows, :], y[testing_rows]) = 0.9467141092685247
mse(m, X[training_rows, :], y[training_rows]) = 1.0203763775483616
rmse(m, X[training_rows, :], y[training_rows]) = 1.0101368113024898
r2(m, X[training_rows, :], y[training_rows]) = 0.9264749827714345
mse(m, X[testing_rows, :], y[testing_rows]) = 1.0383932128691888
rmse(m, X[testing_rows, :], y[testing_rows]) = 1.0190158059957601
r2(m, X[testing_rows, :], y[testing_rows]) = 0.9467141092685247
mse(m, X[training_rows, :], y[training_rows]) = 1.0203763775483616
rmse(m, X[training_rows, :], y[training_rows]) = 1.0101368113024898
r2(m, X[training_rows, :], y[training_rows]) = 0.9264749827714345
mse(m, X[testing_rows, :], y[testing_rows]) = 1.0383932128691888
rmse(m, X[testing_rows, :], y[testing_rows]) = 1.0190158059957601
r2(m, X[testing_rows, :], y[testing_rows]) = 0.9467141092685247
ERROR: LoadError: LoadError: syntax: local variable name "N" conflicts with a static parameter
Stacktrace:
[1] top-level scope
@ ~/.julia/packages/MLJ/XYSFt/src/composites.jl:113
[2] include(mod::Module, _path::String)
@ Base ./Base.jl:389
[3] include(x::String)
@ MLJ ~/.julia/packages/MLJ/XYSFt/src/MLJ.jl:1
[4] top-level scope
@ ~/.julia/packages/MLJ/XYSFt/src/MLJ.jl:88
[5] include
@ ./Base.jl:389 [inlined]
[6] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::String)
@ Base ./loading.jl:1169
[7] top-level scope
@ none:1
[8] eval
@ ./boot.jl:360 [inlined]
[9] eval(x::Expr)
@ Base.MainInclude ./client.jl:446
[10] top-level scope
@ none:1
in expression starting at /home/pkgeval/.julia/packages/MLJ/XYSFt/src/composites.jl:113
in expression starting at /home/pkgeval/.julia/packages/MLJ/XYSFt/src/MLJ.jl:1
integration-tests/test-proof-of-concept-mlj.jl: Error During Test at /home/pkgeval/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:39
Got exception outside of a @test
LoadError: Failed to precompile MLJ [add582a8-e3ab-11e8-2d5e-e98b27df1bc7] to /home/pkgeval/.julia/compiled/v1.6/MLJ/rAU56_cerFn.ji.
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:33
[2] compilecache(pkg::Base.PkgId, path::String, cache::Base.TOMLCache, show_errors::Bool)
@ Base ./loading.jl:1304
[3] compilecache
@ ./loading.jl:1257 [inlined]
[4] _require(pkg::Base.PkgId, cache::Base.TOMLCache)
@ Base ./loading.jl:978
[5] require(uuidkey::Base.PkgId, cache::Base.TOMLCache)
@ Base ./loading.jl:871
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:858
[7] include(fname::String)
@ Base.MainInclude ./client.jl:444
[8] macro expansion
@ ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:41 [inlined]
[9] macro expansion
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113 [inlined]
[10] macro expansion
@ ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:40 [inlined]
[11] macro expansion
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113 [inlined]
[12] _inner_runtests()
@ Main ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:29
[13] macro expansion
@ ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:51 [inlined]
[14] (::var"#1#3")()
@ Main ./task.jl:392
in expression starting at /home/pkgeval/.julia/packages/ModelSanitizer/fYC4k/test/integration-tests/test-proof-of-concept-mlj.jl:1
Test Summary: | Pass Error Total
Integration tests | 203 1 204
integration-tests/test-proof-of-concept-dataframes.jl | 60 60
integration-tests/test-proof-of-concept-linearmodel | 143 143
integration-tests/test-proof-of-concept-mlj.jl | 1 1
ModelSanitizer.jl: Error During Test at /home/pkgeval/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:63
Got exception outside of a @test
TaskFailedException
nested task error: Some tests did not pass: 203 passed, 0 failed, 1 errored, 0 broken.
Stacktrace:
[1] sync_end(c::Channel{Any})
@ Base ./task.jl:350
[2] macro expansion
@ ./task.jl:369 [inlined]
[3] runtests()
@ Main ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:49
[4] top-level scope
@ ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:64
[5] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1113
[6] top-level scope
@ ~/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:64
[7] include(fname::String)
@ Base.MainInclude ./client.jl:444
[8] top-level scope
@ none:6
[9] eval(m::Module, e::Any)
@ Core ./boot.jl:360
[10] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:261
[11] _start()
@ Base ./client.jl:485
Test Summary: | Error Total
ModelSanitizer.jl | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/ModelSanitizer/fYC4k/test/runtests.jl:63
ERROR: Package ModelSanitizer errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:19