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1.6.0-DEV-4c805d2310.log
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Julia Version 1.6.0-DEV.913
Commit 4c805d2310 (2020-09-14 14:07 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: Intel(R) Xeon(R) Silver 4114 CPU @ 2.20GHz
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-9.0.1 (ORCJIT, skylake-avx512)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
[ Info: LEGAL NOTICE: package operations send anonymous data about your system to https://pkg.julialang.org (your current package server), including the operating system and Julia versions you are using, and a random client UUID. Running `Pkg.telemetryinfo()` will show exactly what data is sent. See https://julialang.org/legal/data/ for more details about what this data is used for, how long it is retained, and how to opt out of sending it.
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed Rmath ──────────────────────── v0.6.1
Installed PDMats ─────────────────────── v0.10.0
Installed QuadGK ─────────────────────── v2.4.1
Installed SpecialFunctions ───────────── v0.10.3
Installed EcologicalNetworksPlots ────── v0.0.5
Installed DataStructures ─────────────── v0.17.20
Installed EcologicalNetworks ─────────── v0.3.0
Installed SortingAlgorithms ──────────── v0.3.1
Installed OrderedCollections ─────────── v1.3.0
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed FillArrays ─────────────────── v0.9.6
Installed Missings ───────────────────── v0.4.4
Installed DataAPI ────────────────────── v1.3.0
Installed RecipesBase ────────────────── v1.1.0
Installed Combinatorics ──────────────── v1.0.2
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed StatsBase ──────────────────── v0.33.1
Installed Requires ───────────────────── v1.0.2
Installed StatsFuns ──────────────────── v0.9.5
Installed Distributions ──────────────── v0.23.11
Updating `~/.julia/environments/v1.6/Project.toml`
[9f7a259d] + EcologicalNetworksPlots v0.0.5
Updating `~/.julia/environments/v1.6/Manifest.toml`
[861a8166] + Combinatorics v1.0.2
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.17.20
[31c24e10] + Distributions v0.23.11
[f03a62fe] + EcologicalNetworks v0.3.0
[9f7a259d] + EcologicalNetworksPlots v0.0.5
[1a297f60] + FillArrays v0.9.6
[e1d29d7a] + Missings v0.4.4
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.3.0
[90014a1f] + PDMats v0.10.0
[1fd47b50] + QuadGK v2.4.1
[3cdcf5f2] + RecipesBase v1.1.0
[ae029012] + Requires v1.0.2
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[2913bbd2] + StatsBase v0.33.1
[4c63d2b9] + StatsFuns v0.9.5
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing EcologicalNetworksPlots
Status `/tmp/jl_g0XKfW/Project.toml`
[f03a62fe] EcologicalNetworks v0.3.0
[9f7a259d] EcologicalNetworksPlots v0.0.5
[91a5bcdd] Plots v1.6.4
[9a3f8284] Random
[8dfed614] Test
Status `/tmp/jl_g0XKfW/Manifest.toml`
[79e6a3ab] Adapt v2.0.2
[6e34b625] Bzip2_jll v1.0.6+4
[35d6a980] ColorSchemes v3.9.0
[3da002f7] ColorTypes v0.10.9
[5ae59095] Colors v0.12.4
[861a8166] Combinatorics v1.0.2
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[d38c429a] Contour v0.5.5
[9a962f9c] DataAPI v1.3.0
[864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
[31c24e10] Distributions v0.23.11
[5ae413db] EarCut_jll v2.1.5+0
[f03a62fe] EcologicalNetworks v0.3.0
[9f7a259d] EcologicalNetworksPlots v0.0.5
[c87230d0] FFMPEG v0.4.0
[b22a6f82] FFMPEG_jll v4.3.1+2
[1a297f60] FillArrays v0.9.6
[53c48c17] FixedPointNumbers v0.8.4
[d7e528f0] FreeType2_jll v2.10.1+4
[559328eb] FriBidi_jll v1.0.5+5
[28b8d3ca] GR v0.52.0
[5c1252a2] GeometryBasics v0.3.1
[4d00f742] GeometryTypes v0.8.3
[cd3eb016] HTTP v0.8.17
[83e8ac13] IniFile v0.5.0
[c8e1da08] IterTools v1.3.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[c1c5ebd0] LAME_jll v3.100.0+2
[dd192d2f] LibVPX_jll v1.9.0+0
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.8+0
[442fdcdd] Measures v0.3.1
[e1d29d7a] Missings v0.4.4
[77ba4419] NaNMath v0.3.4
[e7412a2a] Ogg_jll v1.3.4+1
[458c3c95] OpenSSL_jll v1.1.1+5
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[91d4177d] Opus_jll v1.3.1+2
[bac558e1] OrderedCollections v1.3.0
[90014a1f] PDMats v0.10.0
[69de0a69] Parsers v1.0.10
[ccf2f8ad] PlotThemes v2.0.0
[995b91a9] PlotUtils v1.0.6
[91a5bcdd] Plots v1.6.4
[1fd47b50] QuadGK v2.4.1
[3cdcf5f2] RecipesBase v1.1.0
[01d81517] RecipesPipeline v0.1.13
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.0.2
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[992d4aef] Showoff v0.3.1
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.33.1
[4c63d2b9] StatsFuns v0.9.5
[09ab397b] StructArrays v0.4.4
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.0.5
[83775a58] Zlib_jll v1.2.11+16
[0ac62f75] libass_jll v0.14.0+3
[f638f0a6] libfdk_aac_jll v0.1.6+3
[f27f6e37] libvorbis_jll v1.3.6+5
[1270edf5] x264_jll v2020.7.14+1
[dfaa095f] x265_jll v3.0.0+2
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
WARNING: Method definition (::Type{EcologicalNetworksPlots.UnravelledLayout{TX, TY} where TY<:Function where TX<:Function})() in module EcologicalNetworksPlots at /home/pkgeval/.julia/packages/EcologicalNetworksPlots/qKaWt/src/static.jl:18 overwritten at /home/pkgeval/.julia/packages/EcologicalNetworksPlots/qKaWt/src/static.jl:19.
** incremental compilation may be fatally broken for this module **
[ Info: Bipartite -- nested
ERROR: LoadError: UndefVarError: Grisu not defined
Stacktrace:
[1] getproperty
@ ./Base.jl:26 [inlined]
[2] plain_precision_heuristic(xs::Vector{Float64})
@ Showoff ~/.julia/packages/Showoff/RaPxi/src/Showoff.jl:84
[3] showoff(xs::Vector{Float64}, style::Symbol)
@ Showoff ~/.julia/packages/Showoff/RaPxi/src/Showoff.jl:117
[4] optimal_ticks_and_labels(sp::Plots.Subplot{Plots.GRBackend}, axis::Plots.Axis, ticks::Nothing)
@ Plots ~/.julia/packages/Plots/4EfKl/src/axes.jl:193
[5] optimal_ticks_and_labels
@ ~/.julia/packages/Plots/4EfKl/src/axes.jl:135 [inlined]
[6] get_ticks(sp::Plots.Subplot{Plots.GRBackend}, axis::Plots.Axis)
@ Plots ~/.julia/packages/Plots/4EfKl/src/axes.jl:239
[7] _update_min_padding!(sp::Plots.Subplot{Plots.GRBackend})
@ Plots ~/.julia/packages/Plots/4EfKl/src/backends/gr.jl:890
[8] iterate
@ ./generator.jl:47 [inlined]
[9] _collect(c::Matrix{AbstractLayout}, itr::Base.Generator{Matrix{AbstractLayout}, typeof(Plots._update_min_padding!)}, #unused#::Base.EltypeUnknown, isz::Base.HasShape{2})
@ Base ./array.jl:699
[10] collect_similar
@ ./array.jl:628 [inlined]
[11] map
@ ./abstractarray.jl:2233 [inlined]
[12] _update_min_padding!(layout::Plots.GridLayout)
@ Plots ~/.julia/packages/Plots/4EfKl/src/layouts.jl:310
[13] prepare_output(plt::Plots.Plot{Plots.GRBackend})
@ Plots ~/.julia/packages/Plots/4EfKl/src/plot.jl:184
[14] show
@ ~/.julia/packages/Plots/4EfKl/src/output.jl:214 [inlined]
[15] png(plt::Plots.Plot{Plots.GRBackend}, fn::String)
@ Plots ~/.julia/packages/Plots/4EfKl/src/output.jl:7
[16] savefig(plt::Plots.Plot{Plots.GRBackend}, fn::String)
@ Plots ~/.julia/packages/Plots/4EfKl/src/output.jl:124
[17] savefig(fn::String)
@ Plots ~/.julia/packages/Plots/4EfKl/src/output.jl:129
[18] top-level scope
@ ~/.julia/packages/EcologicalNetworksPlots/qKaWt/test/runtests.jl:23
[19] include(fname::String)
@ Base.MainInclude ./client.jl:444
[20] top-level scope
@ none:6
in expression starting at /home/pkgeval/.julia/packages/EcologicalNetworksPlots/qKaWt/test/runtests.jl:18
ERROR: Package EcologicalNetworksPlots errored during testing
Stacktrace:
[1] pkgerror(::String, ::Vararg{String, N} where N)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1580
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:328
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:315
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:67 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:19