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Example on MIL/CLAM #2
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@Tato14 I edited the Experiment file in the rpeo. I hope it will solve the problem. |
Hi. Thanks for the reply. I didn't notice that you can specify However, I am still having some issues. It seems that there is an issue when you try to create the splits for the CV. In the following code you can see how
Surfing a little bit on the repo, I found that Get_split_from_df use a |
@Tato14 This problem should have been solved now. Can you check it please and write me back about the result? |
@narminGhaffari It seems that the same error persists.
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@Tato14 It seems that your extract_feature flag is still False, so it is not extracting the feature vectors and since the corresponding folder is empty, then it is not able to load them. |
@narminGhaffari sorry I didn't saw this. Still getting an error:
Tried to add |
@Tato14 Check it now please! |
Hi, it seems that we are improving. I am still getting an error but I guess is because of the filename, could you confirm that?
Thanks! |
@Tato14 Yes, it is. Our workflow creates patches with names like aaaa_(123, 455).png. |
@narminGhaffari thanks for the clarification. Since the dataloader expect a filename and coordinate pair was easier to edit the code for my specific filename structure. Now it seems that everything is working nicely! Just one more thing before closing: Thanks again for the great feedback! |
@narminGhaffari still having the
After feature extraction. It seems that the splits are not loaded properly but I am not quite sure why. |
@Tato14 I am checking the repo, will write you back as soon as I found the problem. |
Hi,
Could you please share an ExperimentFile using MIL/CLAM pipeline?
Thanks
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