-
Notifications
You must be signed in to change notification settings - Fork 8
Pre‐trained data
raquellewei edited this page Nov 16, 2023
·
20 revisions
These databases were pre-trained using the 214 release of bacterial and archaeal data from GTDB, which GTDB spans 402,709 genomes organized into 85,205 species clusters. For more information on the raw data, refer to the statistics here.
| K-mer size | ANI | Zip file |
|---|---|---|
| 21 | 0.8 | Download |
| 21 | 0.95 | Download |
| 21 | 0.995 | Download |
| 21 | 0.9995 | Download |
| 31 | 0.8 | Download |
| 31 | 0.95 | Download |
| 31 | 0.995 | Download |
| 31 | 0.9995 | Download |
| 51 | 0.8 | Download |
| 51 | 0.95 | Download |
| 51 | 0.995 | Download |
| 51 | 0.9995 | [Download]（https://zenodo.org/records/10113572/files/gtdb-rs214-reps.k51_0.9995_pretrained.zip?download=1) |
| K-mer size | ANI | Zip file |
|---|---|---|
| 21 | 0.8 | Download |
| 21 | 0.95 | Download |
| 21 | 0.995 | Download |
| 21 | 0.9995 | Download |
| 31 | 0.8 | Download |
| 31 | 0.95 | Download |
| 31 | 0.995 | Download |
| 31 | 0.9995 | Download |
| 51 | 0.8 | Download |
| 51 | 0.95 | Download |
| 51 | 0.995 | Download |
| 51 | 0.9995 | Download |
| K-mer size | ANI | Zip file |
|---|---|---|
| 21 | 0.8 | Download |
| 21 | 0.95 | Download |
| 21 | 0.995 | Download |
| 21 | 0.9995 | Download |
| 31 | 0.8 | Download |
| 31 | 0.95 | Download |
| 31 | 0.995 | Download |
| 31 | 0.9995 | Download |
| 51 | 0.8 | Download |
| 51 | 0.95 | Download |
| 51 | 0.995 | Download |
| 51 | 0.9995 | Download |
| K-mer size | ANI | Zip file |
|---|---|---|
| 21 | 0.8 | Download |
| 21 | 0.95 | Download |
| 21 | 0.995 | Download |
| 21 | 0.9995 | Download |
| 31 | 0.8 | Download |
| 31 | 0.95 | Download |
| 31 | 0.995 | Download |
| 31 | 0.9995 | Download |
| 51 | 0.8 | Download |
| 51 | 0.95 | Download |
| 51 | 0.995 | Download |
| 51 | 0.9995 | Download |