You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When trying to install the ilupp package that Local2Global relies on, it can be installed in the local python environment, but the following error message appears in the conda environment. How to solve it? Can the author provide the conda installation method of Local2Global?
(pyg) [jialh@amdnode2 ~]$ pip install ilupp
Collecting ilupp
Downloading ilupp-1.0.2.tar.gz (155 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 155.4/155.4 kB 708.5 kB/s eta 0:00:00
Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy>=1.11 in ./tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages (from ilupp) (1.22.4)
Requirement already satisfied: scipy in ./tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages (from ilupp) (1.10.0)
Building wheels for collected packages: ilupp
Building wheel for ilupp (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [28 lines of output]
/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-cpython-39
creating build/lib.linux-x86_64-cpython-39/ilupp
copying ilupp/__init__.py -> build/lib.linux-x86_64-cpython-39/ilupp
running build_ext
creating tmp
gcc -pthread -B /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include/python3.9 -c /tmp/tmp8xajzx6c.cpp -o tmp/tmp8xajzx6c.o -std=c++17
gcc -pthread -B /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include/python3.9 -c /tmp/tmp0ehpizre.cpp -o tmp/tmp0ehpizre.o -fvisibility=hidden
building 'ilupp._ilupp' extension
creating build/temp.linux-x86_64-cpython-39
creating build/temp.linux-x86_64-cpython-39/src
gcc -pthread -B /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/pybind11/include -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/pybind11/include -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include/python3.9 -c src/binding.cpp -o build/temp.linux-x86_64-cpython-39/src/binding.o -DVERSION_INFO=\"1.0.2\" -std=c++17 -fvisibility=hidden
gcc: fatal error: Killed signal terminated program cc1plus
compilation terminated.
error: command '/home1/jialh/tools/anaconda3/envs/cxx-compiler/bin/gcc' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for ilupp
Running setup.py clean for ilupp
Failed to build ilupp
Installing collected packages: ilupp
Running setup.py install for ilupp ... error
error: subprocess-exited-with-error
× Running setup.py install for ilupp did not run successfully.
│ exit code: 1
╰─> [40 lines of output]
/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
running install
/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
creating build
creating build/lib.linux-x86_64-cpython-39
creating build/lib.linux-x86_64-cpython-39/ilupp
copying ilupp/__init__.py -> build/lib.linux-x86_64-cpython-39/ilupp
running build_ext
gcc -pthread -B /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include/python3.9 -c /tmp/tmp7smaqdeg.cpp -o tmp/tmp7smaqdeg.o -std=c++17
gcc -pthread -B /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include/python3.9 -c /tmp/tmpzc_7v4je.cpp -o tmp/tmpzc_7v4je.o -fvisibility=hidden
building 'ilupp._ilupp' extension
creating build/temp.linux-x86_64-cpython-39
creating build/temp.linux-x86_64-cpython-39/src
gcc -pthread -B /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -O2 -isystem /home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include -fPIC -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/pybind11/include -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/lib/python3.9/site-packages/pybind11/include -I/home1/jialh/tools/anaconda3/envs/mamba/envs/pyg/include/python3.9 -c src/binding.cpp -o build/temp.linux-x86_64-cpython-39/src/binding.o -DVERSION_INFO=\"1.0.2\" -std=c++17 -fvisibility=hidden
gcc: fatal error: Killed signal terminated program cc1plus
compilation terminated.
error: command '/home1/jialh/tools/anaconda3/envs/cxx-compiler/bin/gcc' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: legacy-install-failure
× Encountered error while trying to install package.
╰─> ilupp
note: This is an issue with the package mentioned above, not pip.
hint: See above for output from the failure.
WARNING: There was an error checking the latest version of pip.
The text was updated successfully, but these errors were encountered:
When trying to install the ilupp package that Local2Global relies on, it can be installed in the local python environment, but the following error message appears in the conda environment. How to solve it? Can the author provide the conda installation method of Local2Global?
The text was updated successfully, but these errors were encountered: