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bootstrap.sh
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bootstrap.sh
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#!/bin/bash
#
# This is an easy-bake script to download and build all UnifyFS's dependencies.
#
# Abort the script if we have any errors
err_report() {
echo "!!!! Previous command failed! (Line number $1) Aborting. !!!!"
exit 1
}
trap 'err_report $LINENO' ERR
make_nproc=4
ROOT="$(pwd)"
mkdir -p deps
mkdir -p install
INSTALL_DIR=$ROOT/install
export PATH=$INSTALL_DIR/bin:$PATH
export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$INSTALL_DIR/lib64:$LD_LIBRARY_PATH
export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:$INSTALL_DIR/lib64/pkgconfig:$PKG_CONFIG_PATH
cd deps
repos=(https://github.com/LLNL/GOTCHA.git
https://github.com/pmodels/argobots.git
https://github.com/mercury-hpc/mercury.git
https://github.com/mochi-hpc/mochi-margo.git
https://github.com/pmodels/openpa.git
https://github.com/ecp-veloc/spath.git
)
# optional builds
use_bmi=0
use_old_margo=0
while [ $# -ge 1 ]; do
case "$1" in
"--with-bmi" )
use_bmi=1 ;;
"--with-old-margo" )
use_old_margo=1 ;;
*)
echo "USAGE ERROR: unknown option $1" ;;
esac
shift
done
if [ $use_old_margo -eq 1 ]; then
argobots_version="v1.1"
libfabric_version="v1.13.2"
mercury_version="v2.1.0"
margo_version="v0.9.6"
else
argobots_version="v1.1"
libfabric_version="v1.13.2"
mercury_version="v2.2.0"
margo_version="v0.13.1"
repos+=(https://github.com/json-c/json-c.git)
fi
if [ $use_bmi -eq 0 ]; then
mercury_bmi="OFF"
mercury_ofi="ON"
repos+=(https://github.com/ofiwg/libfabric.git)
else
mercury_bmi="ON"
mercury_ofi="OFF"
repos+=(https://github.com/radix-io/bmi.git)
fi
for i in "${repos[@]}" ; do
# Get just the name of the project (like "mercury")
name=$(basename $i | sed 's/\.git//g')
if [ -d $name ] ; then
echo "$name already exists, skipping it"
else
if [ "$name" == "mercury" ] ; then
git clone --recurse-submodules $i
else
git clone $i
fi
fi
done
# Assuming automake version starts with 1.#, collect value after initial "1."
automake_sub_version=$(automake --version | head -n1 |
sed 's/[^.]*\.\([0-9]\+\).*/\1/')
# If automake decimal version is < 1.15, install needed versions of autotools
if [ "$automake_sub_version" -lt "15" ]; then
echo "### detected automake version is older than 1.15 ###"
echo "### building required autotools ###"
# Get system name from current automake to avoid using outdated config.guess
sys_name=$(find /usr/share/automake* -name "config.guess" -exec {} \;)
autotools_repos=(http://ftp.gnu.org/gnu/autoconf/autoconf-2.69.tar.gz
http://ftp.gnu.org/gnu/automake/automake-1.15.tar.gz
http://mirror.team-cymru.org/gnu/libtool/libtool-2.4.6.tar.gz
https://pkg-config.freedesktop.org/releases/pkg-config-0.27.1.tar.gz
)
# wget and untar autotools
for j in "${autotools_repos[@]}" ; do
# Get tarball name and project-version name
tar_name=$(basename $j)
name=$(echo $tar_name | sed 's/\.tar.gz//g')
if [ -f $tar_name ] ; then
echo "$tar_name already exists, skipping wget"
else
wget $j
fi
rm -rf $name
tar -zxf $tar_name
done
# build autoconf
echo "### building autoconf ###"
pushd autoconf-2.69
./configure --build=$sys_name --prefix=$INSTALL_DIR
make
make install
popd
# build automake
echo "### building automake ###"
pushd automake-1.15
./configure --prefix=$INSTALL_DIR
make
make install
popd
# build libtool
echo "### building libtool ###"
pushd libtool-2.4.6
./configure --build=$sys_name --prefix=$INSTALL_DIR
make
make install
popd
# build pkg-config
echo "### building pkg-config ###"
pushd pkg-config-0.27.1
./configure --build=$sys_name --prefix=$INSTALL_DIR --with-internal-glib
make
make install
popd
else
echo "### detected automake version is greater than or equal to 1.15 ###"
echo "### skipping autotools build ###"
fi
echo "### building GOTCHA ###"
gotcha_version="1.0.3"
cd GOTCHA
git checkout $gotcha_version
mkdir -p build && cd build
cmake -DCMAKE_INSTALL_PREFIX="$INSTALL_DIR" ..
make -j $make_nproc && make install
cd ..
cd ..
# Only needed for Mercury if using gcc@4.8.x or older
echo "### building openpa ###"
cd openpa
git clean -fdx
git checkout v1.0.4
./autogen.sh
mkdir -p build
cd build
../configure --prefix="$INSTALL_DIR"
make -j $make_nproc && make install
cd ../..
echo "### building argobots ###"
cd argobots
git checkout $argobots_version
./autogen.sh && CC=gcc ./configure --prefix="$INSTALL_DIR"
make -j $make_nproc && make install
cd ..
if [ $use_bmi -eq 1 ]; then
echo "### building bmi ###"
cd bmi
./prepare && ./configure --prefix="$INSTALL_DIR" \
--enable-shared --enable-bmi-only
make -j $make_nproc && make install
cd ..
echo "### skipping libfabric build ###"
else
echo "### skipping bmi build ###"
echo "### building libfabric ###"
cd libfabric
git clean -fdx
git checkout $libfabric_version
./autogen.sh
mkdir -p build
cd build
../configure --prefix="$INSTALL_DIR" \
--enable-sockets --enable-rxm --enable-tcp
make -j $make_nproc && make install
cd ../..
fi
echo "### building mercury ###"
cd mercury
git checkout $mercury_version
git submodule update --init
mkdir -p build && cd build
cmake -DCMAKE_INSTALL_PREFIX="$INSTALL_DIR" \
-DMERCURY_USE_BOOST_PP=ON \
-DMERCURY_USE_CHECKSUMS=ON \
-DMERCURY_USE_SYSTEM_MCHECKSUM=OFF \
-DNA_USE_BMI=$mercury_bmi \
-DNA_USE_OFI=$mercury_ofi \
-DMERCURY_USE_XDR=OFF \
-DBUILD_SHARED_LIBS=ON ..
make -j $make_nproc && make install
cd ../..
if [ $use_old_margo -eq 0 ]; then
echo "### building json-c ###"
cd json-c
git checkout json-c-0.15-20200726
mkdir -p build && cd build
cmake -DCMAKE_INSTALL_PREFIX="$INSTALL_DIR" ..
make -j $make_nproc && make install
cd ../..
else
echo "### skipping json-c build ###"
fi
echo "### building mochi-margo ###"
cd mochi-margo
git checkout $margo_version
./prepare.sh
# Prevent build error on gcc 4.x
if [ "$(gcc --version | head -n1 | sed 's/[^.]* \([0-9]\+\).*/\1/')" -lt "5" ]
then
./configure --prefix="$INSTALL_DIR" CFLAGS="-std=gnu99" --enable-shared
else
./configure --prefix="$INSTALL_DIR" --enable-shared
fi
make -j $make_nproc && make install
cd ..
echo "### building spath ###"
cd spath
git checkout main
mkdir -p build && cd build
cmake -DCMAKE_INSTALL_PREFIX="$INSTALL_DIR" -DMPI=OFF ..
make -j $make_nproc && make install
cd ../..
cd "$ROOT"
echo "*************************************************************************"
echo "Dependencies are all built. You can now build UnifyFS with:"
echo ""
if [ "$automake_sub_version" -lt "15" ] ; then
echo " export PATH=$INSTALL_DIR/bin:\$PATH"
echo -n " export PKG_CONFIG_PATH=/usr/share/pkgconfig:"
echo -n "/usr/lib64/pkgconfig:$INSTALL_DIR/lib/pkgconfig:"
echo "$INSTALL_DIR/lib64/pkgconfig:\$PKG_CONFIG_PATH"
else
echo -n " export PKG_CONFIG_PATH=$INSTALL_DIR/lib/pkgconfig:"
echo "$INSTALL_DIR/lib64/pkgconfig:\$PKG_CONFIG_PATH"
fi
echo -n " export LD_LIBRARY_PATH=$INSTALL_DIR/lib:$INSTALL_DIR/lib64:"
echo "\$LD_LIBRARY_PATH"
echo " ./autogen.sh"
echo -n " ./configure --prefix=$INSTALL_DIR CPPFLAGS=-I$INSTALL_DIR/include "
echo "LDFLAGS=\"-L$INSTALL_DIR/lib -L$INSTALL_DIR/lib64\""
echo " make && make install"
echo ""
echo "*************************************************************************"