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DESCRIPTION
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Package: scRNAseq
Title: Collection of Public Single-Cell RNA-Seq Datasets
Version: 2.21.1
Date: 2025-01-18
Authors@R: c(
person("Davide", "Risso", email = "risso.davide@gmail.com", role = c("aut", "cph")),
person("Michael", "Cole", role="aut"),
person("Aaron", "Lun", role=c("ctb", "cre"), email="infinite.monkeys.with.keyboards@gmail.com"),
person("Alan", "O'Callaghan", role="ctb"),
person("Jens", "Preussner", role="ctb"),
person("Charlotte", "Soneson", role="ctb"),
person("Stephany", "Orjuela", role="ctb"),
person("Daniel", "Bunis", role="ctb"),
person("Milan", "Malfait", role="ctb"))
Description: Gene-level counts for a collection of public scRNA-seq datasets,
provided as SingleCellExperiment objects with cell- and gene-level metadata.
License: CC0
NeedsCompilation: no
Depends:
SingleCellExperiment
Imports:
utils,
methods,
Matrix,
BiocGenerics,
S4Vectors,
SparseArray,
DelayedArray,
GenomicRanges,
SummarizedExperiment,
ExperimentHub (>= 2.3.4),
AnnotationHub (>= 3.3.6),
AnnotationDbi,
ensembldb,
GenomicFeatures,
alabaster.base,
alabaster.matrix,
alabaster.sce,
gypsum,
jsonlite,
DBI,
RSQLite
Suggests:
BiocStyle,
knitr,
rmarkdown,
testthat,
jsonvalidate,
BiocManager
VignetteBuilder: knitr
Encoding: UTF-8
biocViews:
ExperimentHub,
ExperimentData,
ExpressionData,
SequencingData,
RNASeqData,
SingleCellData
BuildResaveData: no
RoxygenNote: 7.3.2