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DESCRIPTION
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DESCRIPTION
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Type: Package
Package: tidytacos
Title: Manipulate Taxonomic Composition Data of Microbial Communities
Version: 1.0.4
Authors@R: c(
person("Stijn", "Wittouck", , "stijn.wittouck@uantwerpen.be", role = c("aut", "cre")),
person("Tim", "Van Rillaer", , "tim.vanrillaer@uantwerpen.be", role = "aut"),
person("Wenke", "Smets", , "wenke.smets@uantwerpen.be", role = "aut"),
person("Sarah", "Lebeer", , "sarah.lebeer@uantwerpen.be", role = "fnd")
)
Description: A toolkit for processing and visualizing taxonomic
composition data of microbial communities, based on the tidyverse
framework.
License: GPL-3 + file LICENSE
URL: https://lebeerlab.github.io/tidytacos/
BugReports:
https://github.com/LebeerLab/tidytacos/issues/new?assignees=TheOafidian&labels=bug&projects=&template=bug_report.md&title=%5BBUG%5D+
Depends:
R (>= 4.1.0)
Imports:
dplyr,
forcats,
ggplot2,
magrittr,
methods,
purrr,
readr,
rlang (>= 0.4.11),
stringr,
tibble,
tidyr,
vegan
Suggests:
ape,
biomformat,
Biostrings,
compositions,
covr,
dada2,
devtools,
eulerr,
factoextra,
fastDummies,
ggpubr,
ggVennDiagram,
igraph,
jsonlite,
knitr,
Matrix,
MCL,
phangorn,
pheatmap,
phyloseq,
plotly,
rmarkdown,
roxygen2,
rstatix,
Rtsne,
seqinr,
SpiecEasi,
testthat (>= 3.1.9),
tidyverse,
umap,
vdiffr
VignetteBuilder:
knitr
Config/testthat/edition: 3
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2