Incorporate report generation into logging #414
Labels
documentation
issues related to improving documentation for the project
hackathon
Issues to tackle in the NIH hackathon
Summary
We should be able to add custom levels to our logging configuration, which should also make it possible to compile our citable report and associated references without manually compiling the strings within the workflow.
Additional Detail
We need to add two new levels to our logging configuration: REPORT and REFERENCES. Each level should have its own formatter, as the report is a paragraph, while the references are a list. We can then load both files, reduce/sort the references, combine the two strings, and write out the full file at the very end of the tedana workflow.
Next Steps
tedana.workflows.tedana.py
into the appropriate functions, with the methodsLGR.report()
andLGR.references()
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