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bowtie and bowtie-build required even for runs with no alignment #55

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MikeAxtell opened this issue Mar 15, 2017 · 1 comment
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bowtie and bowtie-build required even for runs with no alignment #55

MikeAxtell opened this issue Mar 15, 2017 · 1 comment
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Even if run wont involve making an alignment (e.g. --bamfile or --cramfile was set), ShortStack (3.8.1) will still require bowtie to be installed in PATH.
@MikeAxtell MikeAxtell added the bug label Mar 15, 2017
@MikeAxtell MikeAxtell self-assigned this Mar 15, 2017
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Bug fixed in release 3.8.2

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