A question about install HRLDAS #9
Comments
|
Hi Liuxiaoran, Have you solved this issue? I have the same errors trying to compile HRLDASv4.0 on my Ubuntu machine with gfortran. Thank you, Patrick |
|
Hydro.exe has been compiled successfully. The error happens in building utilities. You can ignore if you only use model. |
|
Thank you Wei Yu for your response, and good to know. Still interested in fixing the error in case I want to test the utilities. Also, I do not get these errors when using ifort compiler, so I hope to come up with solution for gfortran. Any further information is much appreciated. Thank you, Patrick |
Hi drnimbusrain |
|
Thank you Liu Xiaoran, that solved the issue in creating both hrldas and create_forcing executable on ubuntu with gfortran. Regards, Patrick |
|
Hi |
|
Dear All, Entering directory `/home/drdinesh/Desktop/sm-wrf/hrldas/hrldas-release-3.7.1/hrldas3.7.1/Utility_routines' rm -f module_date_utilities.f90 /* Copyright (C) 1991-2012 Free Software Foundation, Inc. This file is part of the GNU C Library. The GNU C Library is free software; you can redistribute it and/or The GNU C Library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version. The GNU C Library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details. You should have received a copy of the GNU Lesser General Public License along with the GNU C Library; if not, see License along with the GNU C Library; if not, see http://www.gnu.org/licenses/. */ /* This header is separate from features.h so that the compiler can include it implicitly at the start of every compilation. It must not itself include <features.h> or any other header that includes <features.h> because the implicit include comes before any feature test macros that may be defined in a source file before it first explicitly includes a system header. GCC knows the name of this header in order to preinclude it. */ /* We do support the IEC 559 math functionality, real and complex. */ Can anybody help. I a trying to install HRLDAS 3.7 on centos 7. Regards |
|
Hi, I'm having a similar issue as dineshjnu2020. Using gfortran on Ubuntu 18.04. Regards, Hugo |
DI you figure it out? |
Hi HUgo. |
|
The problem is that for every line, every F90 action, the file '/usr/include/stdc-predef.h' is read. A workaround : First, save a copy of stdc-predef.h . It has worked out pretty well for me. I wish good luck for others. |
|
Hi Dr Dinesh! (cd Utility_routines; make) rm -f module_date_utilities.f rm -f module_model_constants.f rm -f module_wrf_utilities.f rm -f kwm_string_utilities.f make[1]: Leaving directory rm -f module_sf_myjsfc.f rm -f module_sf_sfclay.f rm -f module_sf_noahmplsm.f rm -f module_sf_noahmp_glacier.f rm -f module_sf_noahmp_groundwater.f rm -f module_sf_noahmpdrv.f make[1]: Leaving directory rm -f module_hrldas_netcdf_io.f rm -f module_NoahMP_hrldas_driver.f REAL, DIMENSION(MAX_SOIL_LEVELS) :: soil_thick_input ! depth to soil in REAL, DIMENSION(MAX_SOIL_LEVELS) :: soil_thick_input ! depth to soil in REAL, DIMENSION(MAX_SOIL_LEVELS) :: soil_thick_input ! depth to soil in Any thoughts? |
|
The error seems to be associated with netcdf library. I updated netcdf library by installing both netcdf-fortran and netcdf-c library and that worked for me. I think HRLDAS need both libraries of netcdf. And some errors are also associated with OS specific which need some exploration on useful resources e. g. user forum of ubuntu/fedora/debian or whatever OS any body uses. I hope this may help you. Dr Dinesh |
|
Hi! COMPILERF90 = /usr/bin/gfortran-7 After addressing both questions I manage to install the model, the only error that I get now is when I try to run the model with the dynamic vegetation option turned on. I hope this information can be useful. |
|
Hi Dinesh and Hugo: COMPILERF90 = gfortran But still, my outputs are: rm -f module_NoahMP_hrldas_driver.f REAL, DIMENSION(MAX_SOIL_LEVELS) :: soil_thick_input ! depth to soil in REAL, DIMENSION(MAX_SOIL_LEVELS) :: soil_thick_input ! depth to soil in REAL, DIMENSION(MAX_SOIL_LEVELS) :: soil_thick_input ! depth to soil in Previously, I've tried with Ubuntu 20.04 and I had the same results. Therefore, this new version was run in CentOS 7. as is suggested in the manual available for HRLDAS version 3.4. Any another suggestion, is more than welcome! |
|
I would suggest to check your user_build_options carefully so that compilation can get all the libraries (GCC, GFOTRAN and other associated Libs). I have used the following options: COMPILERF90 = /usr/bin/gfortran There is another way to set all the paths for libs, include and bins in your bash environment so that the HRLDAS can get these locations by default. Hope, this may work. Dr Dinesh |
|
Dear all, I had similar problems installing HRLDAS. In my case, it came all down to the installation of the netcdf and jasper libraries. Using newer netcdf-c (4.7.4) and netcdf-fortran (4.5.2) libraries and fiddling around with the configure options solved the netcdf issues. For Jasper, I used the old version (1.900.1) and it only worked when I installed it with the option --disable-libjpeg. Now all executables work, but I am still wondering if this was the right way. May I ask how you installed netcdf and Jasper libraries? Best regards, |
|
This works for me: Change "LIBJASPER = -ljpeg -L/home/supplibs/lib -ljasper" to "LIBJASPER = -L/home/supplibs/lib -ljasper -ljpeg" After that change, everything works smoothly. One important lesson I took is always put the dependencies in the back when compiling things! Hope it helps. |
|
Can someone kindly tell me , what is the size of the executable hrldas.exe , after installation? for my case it is 2.1mb . I have denied the bzip2 option. |
|
The size of hrldas.exe executable I got is about 7.7 mb.
|
|
Can u share the user_build_option file. Please tell me the version you are using ?? |
Sure - I am using intel compiler: Options for Linux with Intel Fortran MPI#============================================================================================= Note I also don't use BZIP2 (BZIP2=NO). |
HELLO
I want to install the hrldas 3.7.1 in my Ubuntu 17.04 .
I choose the gfortran for my linux system， I modify the "user_build_options"like this
COMPILERF90 = /usr/bin/gfortran-7
FREESOURCE = -ffree-form -ffree-line-length-none
F90FLAGS = -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring
MODFLAG = -I
LDFLAGS =
CPP = /usr/bin/cpp-6
CPPFLAGS = -P -traditional -D_GFORTRAN_ # -D_HRLDAS_URBAN_
LIBS =
LIBJASPER = -ljpeg -L/usr/local/JASPER/lib -ljasper
INCJASPER = -I/usr/local/JASPER/include
NETCDFMOD = -I/usr/local/netcdf/include
NETCDFLIB = -L/usr/local/netcdf/lib -lnetcdf -lnetcdff
BZIP2 = NO
BZIP2_LIB = -lbz2
BZIP2_INCLUDE = -I/opt/local/include
RM = rm -f
CC = /usr/bin/gcc-6
But when I type 'make' . I encountered an error like this
lxr@ubuntu:~/hrldas-release-3.7.1/HRLDAS$ make
(cd Utility_routines; make)
make[1]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/Utility_routines'
rm -f module_date_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_date_utilities.F > module_date_utilities.f90
/usr/bin/gfortran-7 -o module_date_utilities.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_date_utilities.f90
rm -f module_model_constants.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_model_constants.F > module_model_constants.f90
/usr/bin/gfortran-7 -o module_model_constants.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_model_constants.f90
rm -f module_wrf_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_wrf_utilities.F > module_wrf_utilities.f90
/usr/bin/gfortran-7 -o module_wrf_utilities.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_wrf_utilities.f90
rm -f kwm_string_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ kwm_string_utilities.F > kwm_string_utilities.f90
/usr/bin/gfortran-7 -o kwm_string_utilities.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none kwm_string_utilities.f90
make[1]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/Utility_routines'
(cd phys; make)
make[1]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/phys'
rm -f module_sf_noahmplsm.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_sf_noahmplsm.F > module_sf_noahmplsm.f90
/usr/bin/gfortran-7 -o module_sf_noahmplsm.o -c -I../Utility_routines -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_sf_noahmplsm.f90
rm -f module_sf_noahmp_glacier.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_sf_noahmp_glacier.F > module_sf_noahmp_glacier.f90
/usr/bin/gfortran-7 -o module_sf_noahmp_glacier.o -c -I../Utility_routines -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_sf_noahmp_glacier.f90
rm -f module_sf_noahmp_groundwater.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_sf_noahmp_groundwater.F > module_sf_noahmp_groundwater.f90
/usr/bin/gfortran-7 -o module_sf_noahmp_groundwater.o -c -I../Utility_routines -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_sf_noahmp_groundwater.f90
rm -f module_sf_noahmpdrv.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_sf_noahmpdrv.F > module_sf_noahmpdrv.f90
/usr/bin/gfortran-7 -o module_sf_noahmpdrv.o -c -I../Utility_routines -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none module_sf_noahmpdrv.f90
make[1]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/phys'
(cd IO_code; make)
make[1]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/IO_code'
rm -f module_hrldas_netcdf_io.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ -I/usr/local/netcdf/include module_hrldas_netcdf_io.F > module_hrldas_netcdf_io.f90
/usr/bin/gfortran-7 -o module_hrldas_netcdf_io.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none -I ../MPP -I../Utility_routines -I/usr/local/netcdf/include module_hrldas_netcdf_io.f90
rm -f module_NoahMP_hrldas_driver.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ module_NoahMP_hrldas_driver.F > module_NoahMP_hrldas_driver.f90
/usr/bin/gfortran-7 -o module_NoahMP_hrldas_driver.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none -I -I.
-I../phys -I../Utility_routines -I/usr/local/netcdf/include module_NoahMP_hrldas_driver.f90
f951: Warning: Nonexistent include directory ‘-I.’ [-Wmissing-include-dirs]
rm -f main_hrldas_driver.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -D_HRLDAS_OFFLINE_ main_hrldas_driver.F > main_hrldas_driver.f90
/usr/bin/gfortran-7 -o main_hrldas_driver.o -c -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -ffree-form -ffree-line-length-none -I ../MPP -I.
-I../phys -I../Utility_routines -I/usr/local/netcdf/include main_hrldas_driver.f90
make[1]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/IO_code'
(cd run; make)
make[1]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/run'
echo " -Wl,-rpath, -L -lhdf5 -lz"
-Wl,-rpath, -L -lhdf5 -lz
/usr/bin/gfortran-7 -o hrldas.exe -I../IO_code -I../phys ../IO_code/main_hrldas_driver.o ../IO_code/module_hrldas_netcdf_io.o ../phys/module_sf_noahmpdrv.o ../phys/module_sf_noahmplsm.o ../phys/module_sf_noahmp_glacier.o ../phys/module_sf_noahmp_groundwater.o ../Utility_routines/module_wrf_utilities.o ../Utility_routines/module_model_constants.o ../Utility_routines/module_date_utilities.o ../Utility_routines/kwm_string_utilities.o ../IO_code/module_NoahMP_hrldas_driver.o -L/usr/local/netcdf/lib -lnetcdf -lnetcdff
make[1]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/run'
(cd HRLDAS_forcing; make)
make[1]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing'
(cd lib; make)
make[2]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib'
rm -f module_grib2_tables.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_grib2_tables.F > module_grib2_tables.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_grib2_tables.f90
rm -f module_mapinfo.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_mapinfo.F > module_mapinfo.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_mapinfo.f90
rm -f kwm_date_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO kwm_date_utilities.F > kwm_date_utilities.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include kwm_date_utilities.f90
rm -f module_grib_common.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_grib_common.F > module_grib_common.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_grib_common.f90
rm -f module_grib1.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_grib1.F > module_grib1.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_grib1.f90
rm -f module_grib2.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_grib2.F > module_grib2.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_grib2.f90
rm -f trig_degrees.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO trig_degrees.F > trig_degrees.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include trig_degrees.f90
rm -f module_llxy.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_llxy.F > module_llxy.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_llxy.f90
rm -f module_input_data_structure.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_input_data_structure.F > module_input_data_structure.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_input_data_structure.f90
rm -f arguments_module.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO arguments_module.F > arguments_module.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include arguments_module.f90
rm -f gbytesys.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO gbytesys.F > gbytesys.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include gbytesys.f90
rm -f swap4f.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO swap4f.F > swap4f.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include swap4f.f90
/usr/bin/gcc-6 -c -D_BZIP_NO cio.c
cio.c:31:15: warning: return type defaults to ‘int’ [-Wimplicit-int]
#define copen copen_
^
cio.c:72:1: note: in expansion of macro ‘copen’
copen(nunit, name, mode, err, oflag)
^~~~~
cio.c:36:16: warning: return type defaults to ‘int’ [-Wimplicit-int]
#define bnseek bnseek_
^
cio.c:148:1: note: in expansion of macro ‘bnseek’
bnseek(fd, bread, mode, iprint)
^~~~~~
cio.c: In function ‘bnseek_’:
cio.c:179:31: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘off_t {aka long int}’ [-Wformat=]
printf(" lseek return=%d, *mode=%d\n", i, *mode);
^
cio.c: At top level:
cio.c:33:16: warning: return type defaults to ‘int’ [-Wimplicit-int]
#define bnread bnread_
^
cio.c:186:1: note: in expansion of macro ‘bnread’
bnread(fd, buf, nbuf, bread, ios, idiag)
^~~~~~
cio.c:34:16: warning: return type defaults to ‘int’ [-Wimplicit-int]
#define bnwrit bnwrit_
^
cio.c:237:1: note: in expansion of macro ‘bnwrit’
bnwrit(fd, buf, nbuf, bwritten, err, idiag)
^~~~~~
cio.c:32:16: warning: return type defaults to ‘int’ [-Wimplicit-int]
#define cclose cclose_
^
cio.c:271:1: note: in expansion of macro ‘cclose’
cclose(nunit, iprint, err)
^~~~~~
rm -f kwm_grid_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO kwm_grid_utilities.F > kwm_grid_utilities.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include kwm_grid_utilities.f90
rm -f kwm_timing_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO kwm_timing_utilities.F > kwm_timing_utilities.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include kwm_timing_utilities.f90
rm -f kwm_string_utilities.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO kwm_string_utilities.F > kwm_string_utilities.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include kwm_string_utilities.f90
/usr/bin/gcc-6 -c swap4c.c
rm -f get_unused_unit.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO get_unused_unit.F > get_unused_unit.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include get_unused_unit.f90
/usr/bin/gcc-6 -c -I/usr/local/JASPER/include decode_jpeg2000.c
/usr/bin/gcc-6 -c -D_BZIP_NO io_f.c
rm -f module_grib.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_grib.F > module_grib.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_grib.f90
rm -f module_geo_em.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ -DBIT32 -D_BZIP_NO module_geo_em.F > module_geo_em.f90
/usr/bin/gfortran-7 -c -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I/usr/local/netcdf/include module_geo_em.f90
rm -f libsmda.a
ar q libsmda.a module_grib2.o module_grib2_tables.o trig_degrees.o module_input_data_structure.o arguments_module.o gbytesys.o swap4f.o module_llxy.o cio.o kwm_date_utilities.o kwm_grid_utilities.o kwm_timing_utilities.o kwm_string_utilities.o swap4c.o get_unused_unit.o decode_jpeg2000.o io_f.o module_mapinfo.o module_grib1.o module_grib.o module_grib_common.o module_geo_em.o
ar: creating libsmda.a
make[2]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib'
(make -f Makefile all)
make[2]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing'
rm -f create_forcing.f90
/usr/bin/cpp-6 -P -traditional -D_GFORTRAN_ create_forcing.F > create_forcing.f90
/usr/bin/gfortran-7 -ffree-form -ffree-line-length-none -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -c -I/usr/local/netcdf/include -I./lib -I./lib create_forcing.f90
(cd lib; make)
make[3]: Entering directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib'
/usr/bin/gfortran-7 -o create_forcing.exe -I./lib -g -fconvert=big-endian -fbounds-check -fno-range-check -fno-underscoring -I./lib create_forcing.o
-L./lib -lsmda -L/usr/local/netcdf/lib -lnetcdf -lnetcdff -ljpeg -L/usr/local/JASPER/lib -ljasper
./lib/libsmda.a(module_grib2.o): In function
__module_grib2_MOD_fortran_decode_jpeg2000': /home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib2.f90:148: undefined reference toinfo_jpeg2000'/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib2.f90:156: undefined reference to
decode_jpeg2000' ./lib/libsmda.a(module_grib.o): In function__module_grib_MOD_findgrib':/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:186: undefined reference to
io_fread' /home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:203: undefined reference toio_fread'/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:223: undefined reference to
io_fread' /home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:280: undefined reference toio_ftell'./lib/libsmda.a(module_grib.o): In function
__module_grib_MOD_getgrib': /home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:114: undefined reference toio_fread'./lib/libsmda.a(module_grib.o): In function
__module_grib_MOD_gribclose': /home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:77: undefined reference toc_close'./lib/libsmda.a(module_grib.o): In function
__module_grib_MOD_gribopen': /home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing/lib/module_grib.f90:67: undefined reference toc_gribopen'collect2: error: ld returned 1 exit status
Makefile:28: recipe for target 'create_forcing.exe' failed
make[2]: *** [create_forcing.exe] Error 1
make[2]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing'
Makefile:12: recipe for target 'default' failed
make[1]: *** [default] Error 2
make[1]: Leaving directory '/home/lxr/hrldas-release-3.7.1/HRLDAS/HRLDAS_forcing'
Makefile:8: recipe for target 'all' failed
make: *** [all] Error 2
”undefined reference to `info_jpeg2000' “ I don't know how to solve these undefined reference problems.
I have not changed any other code. So I hope you an solve my problem.
By the way ,I can successfully install the HRLDAS-3.6 in my conputer.(didn't change the gnu,netcdf,jasper et al)
I'm looking forward to your reply.
Many thanks and best wishes!
liuxiaoran
The text was updated successfully, but these errors were encountered: