pre-commit

#!/bin/bash

# Edit this information to be truthful and current
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
REV="2.2.1"
AUTH="David Godlove"                                                          
EMAIL="godlovedc@helix.nih.gov"                                               
AUTH_DATE='Fri Sep 23 17:22:25 EDT 2016'


# Make sure to put these tags in the files you want annotated
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
tag1='# ~~~~The following text is automatically generated. Do not edit manually.~~~~'
tag2='# ~~~~~~~~~~~~~~~~~~~~~~~~ Do not edit above this line.~~~~~~~~~~~~~~~~~~~~~~~'

COMMIT_AUTH=$(git var GIT_AUTHOR_IDENT | awk '{print $1,$2}')
COMMIT_DATE=$(date)

function _anotate_file {
    file=$1
    grep -B100000 "${tag1}" ${file} > tmp 
    cat >> tmp <<END_OF_HEADER
# ============================================================================
#                                                                             
#                            PUBLIC DOMAIN NOTICE                             
#                     Center for Information Technology (CIT)                 
#                                                                             
#  This software/database is a "United States Government Work" under the      
#  terms of the United States Copyright Act.  It was written as part of       
#  the author's official duties as a United States Government employee and    
#  thus cannot be copyrighted.  This software is freely available             
#  to the public for use.  The Center for Information Technology and the U.S. 
#  Government have not placed any restriction on its use or reproduction.     
#                                                                             
#  Although all reasonable efforts have been taken to ensure the accuracy     
#  and reliability of the software and data, CIT and the U.S.                 
#  Government do not and cannot warrant the performance or results that       
#  may be obtained by using this software or data. CIT and the U.S.           
#  Government disclaim all warranties, express or implied, including          
#  warranties of performance, merchantability or fitness for any particular   
#  purpose.                                                                   
#                                                                             
#  Please cite the author and the "NIH Biowulf Cluster" in any work or product
#  based on this material.                                                    
#                                                                             
#  Author:    $AUTH                                                      
#  Email:     $EMAIL                                            
#  Date:      $AUTH_DATE                                       
#                                                                            
#  Last edit: $COMMIT_AUTH                                                           
#  On Date:   $COMMIT_DATE                                                                   
#  Revision:  $REV                                                           
# ============================================================================
                                                                              
AUTH="$AUTH"
EMAIL="$EMAIL"
AUTH_DATE="$AUTH_DATE"
COMMIT_AUTH="$COMMIT_AUTH"
COMMIT_DATE="$COMMIT_DATE"
REV="$REV"
END_OF_HEADER
    grep -A100000 "${tag2}" ${file} >> tmp 
    mv tmp ${file}
    chmod 755 ${file}
}


# List the files that should be anotated with this info
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_anotate_file gpu4singularity