dataDistribution_UI.m

function varargout = dataDistribution_UI(varargin)
% DATADISTRIBUTION_UI MATLAB code for dataDistribution_UI.fig
%      DATADISTRIBUTION_UI, by itself, creates a new DATADISTRIBUTION_UI or raises the existing
%      singleton*.
%
%      H = DATADISTRIBUTION_UI returns the handle to a new DATADISTRIBUTION_UI or the handle to
%      the existing singleton*.
%
%      DATADISTRIBUTION_UI('CALLBACK',hObject,eventData,handles,...) calls the local
%      function named CALLBACK in DATADISTRIBUTION_UI.M with the given input arguments.
%
%      DATADISTRIBUTION_UI('Property','Value',...) creates a new DATADISTRIBUTION_UI or raises the
%      existing singleton*.  Starting from the left, property value pairs are
%      applied to the GUI before dataDistribution_UI_OpeningFcn gets called.  An
%      unrecognized property name or invalid value makes property application
%      stop.  All inputs are passed to dataDistribution_UI_OpeningFcn via varargin.
%

% Edit the above text to modify the response to help 

% Last Modified by GUIDE v2.5 10-Dec-2017 14:25:01

% Begin initialization code - DO NOT EDIT
gui_Singleton = 1;
gui_State = struct('gui_Name',       mfilename, ...
                   'gui_Singleton',  gui_Singleton, ...
                   'gui_OpeningFcn', @dataDistribution_UI_OpeningFcn, ...
                   'gui_OutputFcn',  @dataDistribution_UI_OutputFcn, ...
                   'gui_LayoutFcn',  [] , ...
                   'gui_Callback',   []);
if nargin && ischar(varargin{1})
    gui_State.gui_Callback = str2func(varargin{1});
end

if nargout
    [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
else
    gui_mainfcn(gui_State, varargin{:});
end
% End initialization code - DO NOT EDIT


% --- Executes just before dataDistribution_UI is made visible.
function dataDistribution_UI_OpeningFcn(hObject, eventdata, handles, varargin)
% This function has no output args, see OutputFcn.
% hObject    handle to figure
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
% varargin   command line arguments to dataDistribution_UI (see VARARGIN)

% Choose default command line output for dataDistribution_UI
handles.output = hObject;

% Update handles structure
guidata(hObject, handles);

% UIWAIT makes dataDistribution_UI wait for user response (see UIRESUME)
% uiwait(handles.figure1);


% --- Outputs from this function are returned to the command line.
function varargout = dataDistribution_UI_OutputFcn(hObject, eventdata, handles) 
% varargout  cell array for returning output args (see VARARGOUT);
% hObject    handle to figure
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Get default command line output from handles structure
varargout{1} = handles.output; %original
% varargout{1} = getappdata(hObject,'result')


% --- Executes on selection change in popupmenu1.
function popupmenu1_Callback(hObject, eventdata, handles)
% hObject    handle to popupmenu1 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
str = get(hObject,'String');
val = get(hObject,'value');

switch str{val}
    case 'Absolute'
         handles.properties.effectSize = 'absolute';
    case 'Normalized'
         handles.properties.effectSize = 'normalized';
    case 'Standardized'
         handles.properties.effectSize = 'standardized';
    case 'Ratio'
         handles.properties.effectSize = 'ratio';
end

guidata(hObject,handles);
% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu1 contents as cell array
%        contents{get(hObject,'Value')} returns selected item from popupmenu1


% --- Executes during object creation, after setting all properties.
function popupmenu1_CreateFcn(hObject, eventdata, handles)
% hObject    handle to popupmenu1 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: popupmenu controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end


% --- Executes on selection change in popupmenu2.
function popupmenu2_Callback(hObject, eventdata, handles)
% hObject    handle to popupmenu2 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
str = get(hObject,'String');
val = get(hObject,'value');

switch str{val}
    case 'Raw (no transformation)'
    handles.properties.dataTransformation = 'raw';
    case 'Log10 (transformation)'
    handles.properties.dataTransformation = 'log';
end
guidata(hObject,handles);
% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu2 contents as cell array
%        contents{get(hObject,'Value')} returns selected item from popupmenu2


% --- Executes during object creation, after setting all properties.
function popupmenu2_CreateFcn(hObject, eventdata, handles)
% hObject    handle to popupmenu2 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: popupmenu controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end


% --- Executes on selection change in popupmenu3.
function popupmenu3_Callback(hObject, eventdata, handles)
% hObject    handle to popupmenu3 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
str = get(hObject,'String');
val = get(hObject,'value');

switch str{val}
    case 'DerSimonian-Laird'
        handles.properties.tau2estimator = 'DL';
    case 'Hunter-Schmidt'
        handles.properties.tau2estimator = 'HS';
    case 'Hedges'
        handles.properties.tau2estimator = 'H';
    case 'Hatung-Makambi'
        handles.properties.tau2estimator = 'HM';
    case 'Sidik-Jonkman'
        handles.properties.tau2estimator = 'SJ';
    case 'Paule-Mandel'
        handles.properties.tau2estimator = 'PM';
end
guidata(hObject,handles);
% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu3 contents as cell array
%        contents{get(hObject,'Value')} returns selected item from popupmenu3


% --- Executes during object creation, after setting all properties.
function popupmenu3_CreateFcn(hObject, eventdata, handles)
% hObject    handle to popupmenu3 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: popupmenu controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end



function edit3_Callback(hObject, eventdata, handles)
% hObject    handle to edit3 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
str = get(hObject,'String');
arr = strsplit(str{1}, ',');
for i = 1:length(arr);
    ex(i) = str2double(arr{i});
end

handles.properties.excludeStudies =ex;
guidata(hObject,handles);
% Hints: get(hObject,'String') returns contents of edit3 as text
%        str2double(get(hObject,'String')) returns contents of edit3 as a double


% --- Executes during object creation, after setting all properties.
function edit3_CreateFcn(hObject, eventdata, handles)
% hObject    handle to edit3 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: edit controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end



function edit1_Callback(hObject, eventdata, handles)
% hObject    handle to edit1 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
data_name =  get(hObject,'String');
handles.properties.dataCollection = data_name{1};
guidata(hObject,handles);
% Hints: get(hObject,'String') returns contents of edit1 as text
%        str2double(get(hObject,'String')) returns contents of edit1 as a double


% --- Executes during object creation, after setting all properties.
function edit1_CreateFcn(hObject, eventdata, handles)
% hObject    handle to edit1 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: edit controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end


% --- Executes on button press in pushbutton1.
function pushbutton1_Callback(hObject, eventdata, handles)
% hObject    handle to pushbutton1 (see GCBO)
try; handles.properties; catch; handles.properties = []; end
dataDistribution_GUI(handles.properties);


    
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)


% % --- Executes on button press in pushbutton2.
% function pushbutton2_Callback(hObject, eventdata, handles)
% % hObject    handle to pushbutton2 (see GCBO)
% 
% data_name = uigetfile('*.mat','Select excel file for preparation');
% try; handles.properties; catch; handles.properties = []; end;
% file_name = erase(data_name, '.mat');
% set(handles.edit1, 'String', data_name);
% handles.properties.dataCollection = data_name;
% guidata(hObject,handles);
% % eventdata  reserved - to be defined in a future version of MATLAB
% % handles    structure with handles and user data (see GUIDATA)


% --- Executes on button press in pushbutton3.
function pushbutton3_Callback(hObject, eventdata, handles)


data_name = uigetfile('*.mat','Select input data for analysis');
try; handles.properties; catch; handles.properties = []; end;
data_name = erase(data_name, '.mat');
set(handles.edit1, 'String', data_name);
handles.properties.dataCollection = data_name;
guidata(hObject,handles);
% hObject    handle to pushbutton3 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)


% --- Executes on selection change in popupmenu5.
function popupmenu5_Callback(hObject, eventdata, handles)
str = get(hObject,'String');
val = get(hObject,'value');

switch str{val}
    case 'Inverse Standard Error'
        handles.properties.precisionMeasure = 'ISE';
    case 'Standard Error'
        handles.properties.precisionMeasure = 'SE';
    case 'Sample Size'
        handles.properties.precisionMeasure = 'N';   
end
guidata(hObject,handles);
% hObject    handle to popupmenu5 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hints: contents = cellstr(get(hObject,'String')) returns popupmenu5 contents as cell array
%        contents{get(hObject,'Value')} returns selected item from popupmenu5


% --- Executes during object creation, after setting all properties.
function popupmenu5_CreateFcn(hObject, eventdata, handles)
% hObject    handle to popupmenu5 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: popupmenu controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end


% --- Executes on selection change in popupmenu6.
function popupmenu6_Callback(hObject, eventdata, handles)

str = get(hObject,'String');
val = get(hObject,'value');

switch str{val}
    case 'Inverse Variance (Default)'
        handles.properties.weights = 'IV';
    case 'Sample Size'
        handles.properties.weights = 'N';
    case 'Standardized Inverse Variance'
        handles.properties.weights = 'IVS';
end
guidata(hObject,handles);

% --- Executes during object creation, after setting all properties.
function popupmenu6_CreateFcn(hObject, eventdata, handles)

if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end


% --- Executes on button press in checkbox2.
function checkbox2_Callback(hObject, eventdata, handles)

handles.properties.A1 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox2 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox2


% --- Executes on button press in checkbox3.
function checkbox3_Callback(hObject, eventdata, handles)

handles.properties.A2 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox3 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox3


% --- Executes on button press in checkbox4.
function checkbox4_Callback(hObject, eventdata, handles)

handles.properties.A3 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox4 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox4


% --- Executes on button press in checkbox5.
function checkbox5_Callback(hObject, eventdata, handles)

handles.properties.A4 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox5 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox5


% --- Executes on button press in checkbox6.
function checkbox6_Callback(hObject, eventdata, handles)

handles.properties.A5 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox6 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox6


% --- Executes on button press in checkbox7.
function checkbox7_Callback(hObject, eventdata, handles)

handles.properties.A6 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox7 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox7


% --- Executes on button press in checkbox8.
function checkbox8_Callback(hObject, eventdata, handles)

handles.properties.A7 = get(hObject,'value');
guidata(hObject,handles)
% hObject    handle to checkbox8 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox8


% --- Executes on button press in checkbox9.
function checkbox9_Callback(hObject, eventdata, handles)
% hObject    handle to checkbox9 (see GCBO)
handles.properties.A8 = get(hObject,'value');
guidata(hObject,handles)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hint: get(hObject,'Value') returns toggle state of checkbox9



function edit4_Callback(hObject, eventdata, handles)
str = get(hObject,'String');

handles.properties.nClusters =str2double(str);
guidata(hObject,handles);
% hObject    handle to edit4 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Hints: get(hObject,'String') returns contents of edit4 as text
%        str2double(get(hObject,'String')) returns contents of edit4 as a double


% --- Executes during object creation, after setting all properties.
function edit4_CreateFcn(hObject, eventdata, handles)
% hObject    handle to edit4 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    empty - handles not created until after all CreateFcns called

% Hint: edit controls usually have a white background on Windows.
%       See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
    set(hObject,'BackgroundColor','white');
end


% --- Executes on button press in pushbutton4.
function pushbutton4_Callback(hObject, eventdata, handles)

close all; clear all; 
msgbox({'Heterogeneity module has been closed'}, 'Cancelled');
error('Heterogeneity module has been closed');
% hObject    handle to pushbutton4 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)


% --- Executes when uipanel1 is resized.
function uipanel1_SizeChangedFcn(hObject, eventdata, handles)
% hObject    handle to uipanel1 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)