DESCRIPTION

Package: NanoStringNCTools
Title: NanoString nCounter Tools
Description: Tools for NanoString Technologies nCounter Technology.  Provides support for reading RCC files into an ExpressionSet
             derived object.  Also includes methods for QC and normalizaztion of NanoString data.
Version: 1.11.4
Encoding: UTF-8
Authors@R: c(person("Patrick", "Aboyoun", role = c("aut")), 
             person("Nicole", "Ortogero", email = "nortogero@nanostring.com", role = c("aut")), 
             person("Maddy", "Griswold", email = "mgriswold@nanostring.com", role = c("cre")),
             person("Zhi", "Yang", role = c("ctb")))
Depends: R (>= 3.6), Biobase, S4Vectors, ggplot2
Imports: BiocGenerics, Biostrings, ggbeeswarm, ggiraph, ggthemes, grDevices, IRanges,
         methods, pheatmap, RColorBrewer, stats, utils
Suggests: biovizBase, ggbio, RUnit, rmarkdown, knitr, qpdf
License: MIT
Collate: SignatureSet-class.R
         RccMetadata.R
         NanoStringRccSet-class.R
         NanoStringRccSet-validity.R
         NanoStringRccSet-accessors.R
         NanoStringRccSet-signatures.R
         NanoStringRccSet-subset.R
         NanoStringRccSet-utils.R
         NanoStringRccSet-summary.R
         NanoStringRccSet-qc.R
         NanoStringRccSet-normalize.R
         NanoStringRccSet-munge.R
         NanoStringRccSet-ggplot.R
         NanoStringRccSet-autoplot.R
         readRccFile.R
         readRlfFile.R
         readNanoStringRccSet.R
         writeNanoStringRccSet.R
         utils.R
biocViews: GeneExpression, Transcription, CellBasedAssays, DataImport, 
           Transcriptomics, Proteomics, mRNAMicroarray, 
           ProprietaryPlatforms, RNASeq
VignetteEngine: knitr
VignetteBuilder: knitr