New container bart 0.9.00

[vnm-neurodesk]

There is a new container by @dabosch, use this command to test on Neurodesk:

bash /neurocommand/local/fetch_and_run.sh bart 0.9.00 20240722

Or, for testing directly with Singularity:

curl -X GET https://d15yxasja65rk8.cloudfront.net/temporary-builds-new/bart 0.9.00_20240722.simg -O

If test was successful, then add to apps.json to release:
https://github.com/NeuroDesk/neurocommand/edit/main/neurodesk/apps.json

Please close this issue when completed :)

[stebo85]

the download url needs to be curl -X GET https://d15yxasja65rk8.cloudfront.net/temporary-builds-new/bart_0.9.00_20240722.simg -O

I am fixing that now

[stebo85]

and I changed the domain now to https://neurocontainers.neurodesk.org

curl -X GET https://neurocontainers.neurodesk.org/temporary-builds-new/bart_0.9.00_20240722.simg -O

[dabosch]

Bart v0.9.0 compiled with cuda 12.5.1 generates only empty output. I'm now recompiling with an older cuda version to find out which works. 12.0.0 was successful so far.
I don't know if that's an issue with bart or cuda, I'll open an issue in the bart git once I know more

[dabosch]

See mrirecon/bart#334