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Dockstore.json
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Dockstore.json
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{
"refseq": {
"path": "http://hgwdev.cse.ucsc.edu/~jeltje/public_data/genome.fa.gz",
"class": "File"
},
"number_of_procs": 2,
"dnaTumorFilename": {
"path": "https://dcc.icgc.org/api/v1/download?fn=/PCAWG/reference_data/data_for_testing/HCC1143_ds/HCC1143.bam",
"class": "File"
},
"dnaTumorBaiFilename": {
"path": "https://dcc.icgc.org/api/v1/download?fn=/PCAWG/reference_data/data_for_testing/HCC1143_ds/HCC1143.bam.bai",
"class": "File"
},
"dnaNormalFilename": {
"path": "https://dcc.icgc.org/api/v1/download?fn=/PCAWG/reference_data/data_for_testing/HCC1143_ds/HCC1143_BL.bam",
"class": "File"
},
"dnaNormalBaiFilename": {
"path": "https://dcc.icgc.org/api/v1/download?fn=/PCAWG/reference_data/data_for_testing/HCC1143_ds/HCC1143_BL.bam.bai",
"class": "File"
},
"mutations": {
"path": "/mnt/radia.vcf",
"class": "File"
}
}