Skip to content

Latest commit

 

History

History
25 lines (21 loc) · 1.2 KB

introduction.md

File metadata and controls

25 lines (21 loc) · 1.2 KB

Introduction

Welcome! Genvisis is a Java-based software suite that automates best practices for processing and visualizing genomic data.

What can Genvisis do?

  • Call copy number variants (CNVs)
  • Call mitochondrial DNA copy number
  • Export genotype data to VCF format so that it can be imputed to a reference panel
  • Detect mosaic chromosomal alterations (MCAs)
  • Correct for batch effects
  • Visualize CNV and mosaic events
  • Visualize marker quality
  • Visualize the genetic distance between individuals
  • Determine the number of X and Y chromosomes in a subject
  • Compare the relative effect sizes of different genetic signals
  • Visualize genetic signals across all loci in the genome
  • Identify deviation from the expected distribution of p-values

About this documentation

This documentation is for Genvisis x.x.x (released 20xx-xx-xx). If you are working offline, or using a Genvisis project built in an older version, you can find relevant documentation within Genvisis (in the Toolbar, go to Help > Documentation).

Citing Genvisis

Please cite Genvisis as follows: __________________.

Questions about Genvisis?

If the Genvisis documentation does not answer your questions, please contact ______________.