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Running SurvivalNet #20

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agitter opened this issue Jul 12, 2017 · 0 comments
Open

Running SurvivalNet #20

agitter opened this issue Jul 12, 2017 · 0 comments

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@agitter
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agitter commented Jul 12, 2017

I read your preprint and have a few questions about running SurvivalNet on TCGA data or my own data.

The paper mentioned that a Docker container is available. Can you please provide a link?

Do you have a full list of dependencies for running SurvivalNet outside Docker? requirements.txt is empty.

What license is applicable? The LICENSE file is also empty.

Do you have an example of the input data format? I saw in examples/Run.py that the -ip argument takes a .mat file as input, but I'm not sure how to prepare that file. Could you add the default ./data/Brain_Integ.mat dataset to the repository to provide a runnable example?

Thanks for the help. I'm looking forward to using your method.

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