do_all_python.sh

#!/bin/bash

set -e

# load global variables
source ${PWD}/common/global_vars_py.sh

# parse cline arguments
source ${PWD}/common/cmd_line_options.sh

# check that all basic variables are set, otherwise leave
check_minimum_vars_set_python

echo ""
echo "--------------------------------------------"
echo " current setting is: "
echo ""
print_global_vars

# set env if not already set
if [[ ! -z ${SETENVscript} ]]; then
    echo "loading environment from ${SETENVscript}"
    source ${SETENVscript}
    echo "PATH = $PATH"
else
    echo "--with-env-script NOT set, so we assume env is set already"
fi

# create working dir if not existing
[[ ! -d ${WORKINGDIR} ]] && mkdir ${WORKINGDIR}

# create subworking dir if not existing
PYWORKINGDIR=${WORKINGDIR}/python
[[ ! -d ${PYWORKINGDIR} ]] && mkdir ${PYWORKINGDIR}

## wipe everything if set to 1
#[[ $WIPEEXISTING = 1 ]] && rm -rf ${PYWORKINGDIR}/*

#---------------------------
# only build
#---------------------------
if [ $WHICHTASK = "build" ]; then
    source ${TOPDIR}/python/build_scripts/build.sh
fi

#---------------------------
# rom: lspg or galerkin
#---------------------------
if [ $WHICHTASK = "lspg" ] || [ $WHICHTASK = "galerkin" ];
then
    # check if the build was already done
    if [ ! -d ${PYWORKINGDIR}/build ]; then
	echo "there is no build in the target folder, do that first"
	exit 0
    fi
    # check if the basis are present
    BASISDIRNAME=
    [[ $WHICHTASK = "lspg" ]] && BASISDIRNAME=fom_bdf1_basis
    [[ $WHICHTASK = "galerkin" ]] && BASISDIRNAME=fom_rk4_basis
    # look for the basis inside the sibiling cpp folder
    if [ ! -d ${WORKINGDIR}/cpp/data_${BASISDIRNAME} ]; then
	echo "there is not basis dir in the target folder, do that first"
	exit 0
    fi

    # create folder inside workindir
    destDir=${PYWORKINGDIR}/"data_"${WHICHTASK}
    [[ ! -d ${destDir} ]] && mkdir ${destDir}

    # alias the name of target executable
    EXENAME=
    [[ $WHICHTASK = "lspg" ]] && EXENAME=main_rom_lspg
    [[ $WHICHTASK = "galerkin" ]] && EXENAME=main_rom_galerkin

    # link the bindings library
    if [ $WHICHTASK = "lspg" ]; then
	[[ -f ${destDir}/pressio4pyLspg.so ]] && rm ${destDir}/pressio4pyLspg.so
	ln -s ${PYWORKINGDIR}/build/pressio4pyLspg.so ${destDir}
    fi
    if [ $WHICHTASK = "galerkin" ]; then
	[[ -f ${destDir}/pressio4pyGalerkin.so ]] && rm ${destDir}/pressio4pyGalerkin.so
	ln -s ${PYWORKINGDIR}/build/pressio4pyGalerkin.so ${destDir}
    fi

    # copy all pything scripts there
    cp ${TOPDIR}/python/run_scripts/run_rom_timing.py ${destDir}/
    cp ${TOPDIR}/python/src/burgers1d.py ${destDir}/
    if [ $WHICHTASK = "lspg" ]; then
	cp ${TOPDIR}/python/src/main_rom_lspg.py ${destDir}/
	cp ${TOPDIR}/common/constants_lspg.py ${destDir}/constants.py
    fi
    if [ $WHICHTASK = "galerkin" ]; then
	cp ${TOPDIR}/python/src/main_rom_galerkin.py ${destDir}/
	cp ${TOPDIR}/common/constants_galerkin.py ${destDir}/constants.py
    fi

    USEDENSE=0
    [[ ${JACOBIANTYPE} == dense ]] && USEDENSE=1

    # enter there and run
    cd ${destDir}
    python run_rom_timing.py --exe=${EXENAME} --basis-dir-name=${BASISDIRNAME} -dense-jac=${USEDENSE}
    cd ${TOPDIR}
fi