Starting MonaiLabel server with Multiple inputs #1424
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Meant to post this Discussion on MonaiLabel, not under tutorials. Closing since this is a duplicate now. The discussion is now found here |
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I have been working with 4D Multimodal registered data in MonaiBundle and am able to define a Datalist with multiple paths as the input for one "Image". Is there a way to set up the MonaiLabel application to accept a Datalist like Monaibundle does? If not would a secondary script that just appends the datastore.json file that is created when I pass it a path to the standard studies directory?
Any suggestions would be greatly appreciated! Thank you in advance.
For clarity Here is the file structure I am working with:
Studies Directory:
├── sub1
│ ├── Co-registered images
│ │ ├── modality_1.nii.gz
│ │ ├── modality_2.nii.gz
│ │ └── modality_3.nii.gz
│ └── label images
└── sub2
In Monai bundle I can pass it a list of dictionaries organized like so:
{
"image": [
"path_to_modality_1",
"path_to_modality_2",
"path_to_modality_3"
],
"label": "path_to_label"
}
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