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#!/bin/bash# TODO Put this where it belongs# See: https://tudelft-caroline.atlassian.net/browse/CAR-73 export UNZIP_DISABLE_ZIPBOMB_DETECTION=TRUE
if!echo$MODULEPATH| tr :'\n'| grep -qiF '/project/caroline/Software/modulefiles';thenif [ -z"${MODULEPATH}" ];thenexport MODULEPATH='/project/caroline/Software/modulefiles'elseexport MODULEPATH="${MODULEPATH}:/project/caroline/Software/modulefiles"fifi
This works in a normal conda env but not in Apptainer. By adding the source and load command in the Slurm job script, the module can be loaded normally.
We should add this as a trouble shooting section in the documentation.
The text was updated successfully, but these errors were encountered:
When working with the following module loading script in a Jupyter Notebook in Apptainer
where in
init.sh
This works in a normal conda env but not in Apptainer. By adding the source and load command in the Slurm job script, the module can be loaded normally.
We should add this as a trouble shooting section in the documentation.
The text was updated successfully, but these errors were encountered: