config.yaml

baseurl: "https://curiouscoding.nl"
title: CuriousCoding
theme: hugo-coder
languagecode: en
defaultcontentlanguage: en
paginate: 1000
pygmentsstyle: emacs
pygmentscodefences: true
pygmentscodefencesguesssyntax: true

# Theme parameters
params:
  author: Ragnar {Groot Koerkamp}
  info: PhD High Throughput Bioinformatics @ BMI ETH Zurich
  description: Research on pairwise alignment
  publicBaseUrl: "https://curiouscoding.nl"
  keywords: >-
    blog,developer,phd,computational
    biology,dna,sequencing,personal,bmi,eth,ethz,eth zurich,
    pairwise alignment,DP,A*
  #avatarurl: /images/bike.jpg
  favicon_32: /images/bike-32.png
  favicon_16: /images/bike-64.png
  touchicon: /images/bike-64.png
  footercontent: >-
    This blog is <a href="https://github.com/RagnarGrootKoerkamp/research">open
    source</a> and licensed under <a
    href="https://creativecommons.org/licenses/by-sa/4.0/">CC BY-SA 4.0</a>.
  hideFooter: false
  hideCredits: false
  hideCopyright: false
  since: 2021
  enableTwemoji: false
  colorScheme: light
  hidecolorschemetoggle: true
  math: true
  katex: false
  dateFormat: January 2006

  # customCSS: []
  customSCSS: ["css/style.scss", "css/syntax.css"]
  customJS: ["js/toc.js", "js/footnote.js", "js/code.js"]
  customHtml:

  googleTagManager:
    # Old research.curiouscoding.nl tag
    #id: G-Q35J86NN62
    id: G-VC3594H2Q8

  utterances:
    repo: ragnargrootkoerkamp/research
    issueTerm: pathname
    label: comments
    theme: github-dark

  social:
    - name: Github
      icon: fa fa-github fa-2x
      weight: 3
      url: "https://github.com/RagnarGrootKoerkamp/research/"
    - name: Twitter
      icon: fa fa-twitter fa-2x
      weight: 4
      url: "https://twitter.com/curious_coding/"
    # - name: Mastodon
    #   icon: fa fa-mastodon fa-2x
    #   weight: 5
    #   url: "https://genomic.social/@curious_coding"
    #   rel: me
    - name: Google Scholar
      icon: fa google-scholar fa-2x
      weight: 6
      url: https://scholar.google.ch/citations?hl=en&user=yM9CokEAAAAJ
    - name: bioRxiv
      weight: 7
      url: https://www.biorxiv.org/search/author1%3ARagnar%2BGroot%2BKoerkamp
    - name: Arxiv
      weight: 8
      url: https://arxiv.org/search/?query=Ragnar+Groot+Koerkamp&searchtype=author
    - name: Orcid
      icon: fa fa-orcid fa-2x
      weight: 9
      url: https://orcid.org/0000-0002-2091-1237
    - name: Rss
      icon: fa fa-rss fa-2x
      weight: 10
      url: index.xml

markup:
  goldmark:
    renderer:
      unsafe: true
  highlight:
    lineNos: true
    # Use css classes with custom syntax file, instead of inlining colours.
    noClasses: false
    style: vs

taxonomies:
  category: categories
  tag: tags
  author: authors

menu:
  main:
    - name: All posts
      url: /posts/
      weight: 1
    - name: Projects
      url: /pages/projects
      weight: 2
    - name: Publications & Talks
      url: /pages/publications
      weight: 4
    - name: About
      url: /pages/about/
      weight: 8