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How can we know which contig belongs to the bins #351
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The clusters and their members are in the file "vae_clusters_split.tsv" |
Thanks, I just see that. But I wonder whether the clustername is equal to bin name and if it can be used in DAS_tool refining |
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Hi,
I just used the vamb 4.1.4 and it successfully processed. However, when using DAS_Tool, we need to know the contig is included by which bins. Could you please help me about that? Looking forward to your reply
Here is the vae_clusters_metadata.tsv content, I'm afraid that it shouldn't be the bin and contig file.
name radius peak valley ratio kind bp ncontigs
1 None None loner 31069 1
2 None None loner 19167 1
3 None None loner 18436 1
4 None None loner 18177 1
5 None None loner 17737 1
6 None None loner 17347 1
7 None None loner 16470 1
8 None None loner 15610 1
9 None None loner 14852 1
10 None None loner 14364 1
11 None None loner 13086 1
12 None None loner 12522 1
13 None None loner 12432 1
14 None None loner 12379 1
15 None None loner 12102 1
16 None None loner 12042 1
17 None None loner 12004 1
18 None None loner 11824 1
19 None None loner 11771 1
20 None None loner 11707 1
21 None None loner 11648 1
22 None None loner 10867 1
23 None None loner 10408 1
24 None None loner 10042 1
25 0.075 0.0 normal 16165 2
26 None None loner 9981 1
27 None None loner 9939 1
28 None None loner 9883 1
29 None None loner 9733 1
30 None None loner 9599 1
31 None None loner 9410 1
32 None None loner 9343 1
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