-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathRF00044.sto
42 lines (41 loc) · 6.72 KB
/
RF00044.sto
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
# STOCKHOLM 1.0
#=GF ID Phage_pRNA
#=GF DE Bacteriophage pRNA
#=GF CC New structure 1FOQ_A
#=GF CC New structure 1FOQ_B
#=GF CC New structure 1FOQ_C
#=GF CC New structure 1FOQ_D
#=GF CC New structure 1FOQ_E
#=GF CC New structure 6QYZ_A
#=GF CC New structure 6QYZ_B
#=GF CC New structure 6QYZ_C
#=GF CC New structure 6QYZ_D
#=GF CC New structure 6QYZ_E
#=GF CC New structure 7JQQ_K
#=GF CC New structure 7JQQ_L
#=GF CC New structure 7JQQ_M
#=GF CC New structure 7JQQ_N
#=GF CC New structure 7JQQ_O
V01121.1/318-75 ..AAUGGUACGGUACUUCCAUUGUCAUGUGUAUGUUGGGGAUUAAACCCUGAUUGAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUGAUAACCUUUUACAUGCGACACAGACGAAGCGCUAAAACGUGGGAUUCUGUGUCGUUUUAUGUUGUUCAUUGACAAACCUAUCUAGUAGGUCUAUAGAUUGAUAUAUUAAGUAGUAGUUUCCCUCCCUGAU
V01155.1/318-75 ..AAUGGUACGGUACUUCCAUUGUCAUGUGUAUGUUGGGGAUUAAACCCUGAUUGAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUGAUAACCUUUUACAUGCGACACAGACGAAGCGCUAAAACGUGGGAUUCUGUGUCGUUUUAUGUUGUUCAUUGACAAACCUAUCUAGUAGGUCUAUAGAUUGAUAUAUUAAGUAGUAGUUUCCCUCCCUGAU
M11813.1/4883-5126 ..AAUGGUACGGUACUUCCAUUGUCAUGUGUAUGAUGGGGAUUAAACCCUGAUUGAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUGAUAACCUUUUAAAUGCGACACAGACGAAGCGCUAAAACGUGGGAUUCUGUGUCGUUUUAUGUUGUUCAUUGACAAUCCUAUCUAGUAGGACUAUAGAUUGAUAUAUUAAGUAGUGAUCUCCCUGCCCGAU
URS000080E166_10756/1-120 ucAAUGGUACGGUACUUCCAUUGUCAUGUGUAUGUUGGGGAUUAAACCCUGAUUGAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUGAUAA------------------------------------------------------------------------------------------------------------------------------
#=GR URS000080E166_10756/1-120 1FOQ_A_SS ((((.(((((((.((((...(((.((((.((((((.(((.........((((......)))))))))))))...(((((.......))))))))).))))))).).)).)))))))).................................................................................................................................
#=GR URS000080E166_10756/1-120 1FOQ_B_SS ((((.(((((((.((((...(((.((((.((((((.(((.........((((......)))))))))))))...(((((.......))))))))).))))))).).)).)))))))).................................................................................................................................
#=GR URS000080E166_10756/1-120 1FOQ_C_SS ((((.(((((((.((((...(((.((((.((((((.(((.........((((......)))))))))))))...(((((.......))))))))).))))))).).)).)))))))).................................................................................................................................
#=GR URS000080E166_10756/1-120 1FOQ_D_SS ((((.(((((((.((((...(((.((((.((((((.(((.........((((......)))))))))))))...(((((.......))))))))).))))))).).)).)))))))).................................................................................................................................
#=GR URS000080E166_10756/1-120 1FOQ_E_SS ((((.(((((((.((((...(((.((((.((((((.(((.........((((......)))))))))))))...(((((.......))))))))).))))))).).)).)))))))).................................................................................................................................
#=GR URS000080E166_10756/1-120 6QYZ_A_SS ..........................((..(..(.(((..........((.(......).)).))))..).......(((.....)))...)).........................................................................................................................................................
#=GR URS000080E166_10756/1-120 6QYZ_B_SS ..........................((..(..(.(((..........((.(......).)).))))..).......(((.....)))...)).........................................................................................................................................................
#=GR URS000080E166_10756/1-120 6QYZ_C_SS ..........................((..(..(.(((..........((.(......).)).))))..).......(((.....)))...)).........................................................................................................................................................
#=GR URS000080E166_10756/1-120 6QYZ_D_SS ..........................((..(..(.(((..........((.(......).)).))))..).......(((.....)))...)).........................................................................................................................................................
#=GR URS000080E166_10756/1-120 6QYZ_E_SS ..........................((..(..(.(((..........((.(......).)).))))..).......(((.....)))...)).........................................................................................................................................................
URS00023119C3_10756/1-117 GGAAUGGUACGGUACUUCCAUUGUCAUGUGUAUGUUGGGGAUUAAACCCUGAUUGAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCUACUUUCC---------------------------------------------------------------------------------------------------------------------------------
#=GR URS00023119C3_10756/1-117 7JQQ_K_SS ((((.(.((((((((((....(((((((...(.(..(((.........((.((....)).))))).).)........((.......))...))))))).)))))).)).)).))))).................................................................................................................................
#=GR URS00023119C3_10756/1-117 7JQQ_L_SS (.....(...(.(((.(...(((.(.((..((.(.((.(.........(((((....)))))).))).).)......((.......))...).)).))).))))..)....)....).................................................................................................................................
#=GR URS00023119C3_10756/1-117 7JQQ_M_SS ((((.(((((((.((((.....(((.((.....(.((((.........(((((....)))))))))).......(.((.........)).))).)))..)))).).)).)))))))).................................................................................................................................
#=GR URS00023119C3_10756/1-117 7JQQ_N_SS ((((.((((((((((((.....((((((...(((.((((.........(((.(....).)))))))))).......((.........))..))))))..)))))).)).)))))))).................................................................................................................................
#=GR URS00023119C3_10756/1-117 7JQQ_O_SS (((...(.((((.((((.....((((((.....(.((((.........(((........)))))))).......(.(.((.....)).).)))))))..)))).).)).))...))).................................................................................................................................
#=GC SS_cons ..::<<<__________>>>,,,,,,,,,,<<<<<----<<<<<_____>>>>>----------->>>>>,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,((((((-((((,,,,,<<<_____________________>>><<<<<<<<____________>>>>>>>>,,,,,,,,,,,,<<<<<<___>>>>>>,,,,,,,,,,,,,))))))))))<<<_________>>>::
#=GC RF ..AAuGGUACGGUACUUCCaUUGUCAUGUGuauGuUGGGgauuaAACCCugauuGAGUUCAGCCCaCauaCUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCACGCuaCuuUgauaACCUUuuacAUGCGACACAGACGAAGCGCuaaaaCgugggAUUCUGUGUCGUuuuauGuuGUUCAUUGACAAaCCuauCUAguaGGuCUAUAGAUUGAUAuauuaaGuaGuggUuUCCCUcCccgAU
//