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main.tex
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%% bare_conf.tex
%% V1.3
%% 2007/01/11
%% by Michael Shell
%% See:
%% http://www.michaelshell.org/
%% for current contact information.
%%
%% This is a skeleton file demonstrating the use of IEEEtran.cls
%% (requires IEEEtran.cls version 1.7 or later) with an IEEE conference paper.
%%
%% Support sites:
%% http://www.michaelshell.org/tex/ieeetran/
%% http://www.ctan.org/tex-archive/macros/latex/contrib/IEEEtran/
%% and
%% http://www.ieee.org/
%%*************************************************************************
%% Legal Notice:
%% This code is offered as-is without any warranty either expressed or
%% implied; without even the implied warranty of MERCHANTABILITY or
%% FITNESS FOR A PARTICULAR PURPOSE!
%% User assumes all risk.
%% In no event shall IEEE or any contributor to this code be liable for
%% any damages or losses, including, but not limited to, incidental,
%% consequential, or any other damages, resulting from the use or misuse
%% of any information contained here.
%%
%% All comments are the opinions of their respective authors and are not
%% necessarily endorsed by the IEEE.
%%
%% This work is distributed under the LaTeX Project Public License (LPPL)
%% ( http://www.latex-project.org/ ) version 1.3, and may be freely used,
%% distributed and modified. A copy of the LPPL, version 1.3, is included
%% in the base LaTeX documentation of all distributions of LaTeX released
%% 2003/12/01 or later.
%% Retain all contribution notices and credits.
%% ** Modified files should be clearly indicated as such, including **
%% ** renaming them and changing author support contact information. **
%%
%% File list of work: IEEEtran.cls, IEEEtran_HOWTO.pdf, bare_adv.tex,
%% bare_conf.tex, bare_jrnl.tex, bare_jrnl_compsoc.tex
%%*************************************************************************
% *** Authors should verify (and, if needed, correct) their LaTeX system ***
% *** with the testflow diagnostic prior to trusting their LaTeX platform ***
% *** with production work. IEEE's font choices can trigger bugs that do ***
% *** not appear when using other class files. ***
% The testflow support page is at:
% http://www.michaelshell.org/tex/testflow/
% Note that the a4paper option is mainly intended so that authors in
% countries using A4 can easily print to A4 and see how their papers will
% look in print - the typesetting of the document will not typically be
% affected with changes in paper size (but the bottom and side margins will).
% Use the testflow package mentioned above to verify correct handling of
% both paper sizes by the user's LaTeX system.
%
% Also note that the "draftcls" or "draftclsnofoot", not "draft", option
% should be used if it is desired that the figures are to be displayed in
% draft mode.
%
\documentclass[10pt, conference, compsocconf]{IEEEtran}
% Add the compsocconf option for Computer Society conferences.
%
% If IEEEtran.cls has not been installed into the LaTeX system files,
% manually specify the path to it like:
% \documentclass[conference]{../sty/IEEEtran}
\usepackage[single=true, macros=true, xspace=true]{acro}
\usepackage[style=ieee, backend=biber, minnames=1, maxnames=3, url=false]{biblatex}
\usepackage[utf8]{inputenc}
\usepackage{amsmath,graphicx}
\usepackage{float}
\usepackage{ctable}
\usepackage{diagbox}
\usepackage{array}
\usepackage{tabularx}
\usepackage{verbatim}
\usepackage{makecell}
\usepackage{cleveref}
\newcolumntype{?}{!{\vrule width 1pt}}
\newcommand{\newpara}
{
\vskip 0.5cm
}
% *** GRAPHICS RELATED PACKAGES ***
%
\ifCLASSINFOpdf
% \usepackage[pdftex]{graphicx}
% declare the path(s) where your graphic files are
% \graphicspath{{../pdf/}{../jpeg/}}
% and their extensions so you won't have to specify these with
% every instance of \includegraphics
% \DeclareGraphicsExtensions{.pdf,.jpeg,.png}
\else
% or other class option (dvipsone, dvipdf, if not using dvips). graphicx
% will default to the driver specified in the system graphics.cfg if no
% driver is specified.
% \usepackage[dvips]{graphicx}
% declare the path(s) where your graphic files are
% \graphicspath{{../eps/}}
% and their extensions so you won't have to specify these with
% every instance of \includegraphics
% \DeclareGraphicsExtensions{.eps}
\fi
\input{content/acronyms.tex}
\bibliography{content/bibliography.bib}
\begin{document}
\title{Two schemes for automated diagnosis of Lentigo on Confocal Microscopy images}
\author{
\IEEEauthorblockN{R. Cendre, A. Mansouri, Y. Benezeth, F. Marzani}
\IEEEauthorblockA{ImViA EA 7535, Univ. Bourgogne Franche-Comté\\
Dijon, France\\
Email: romain.cendre@gmail.com}
\and
\IEEEauthorblockN{J-L. Perrot, E. Cinotti}
\IEEEauthorblockA{Service de Dermatologie-Oncologie-Allergologie\\
CHU de Saint-Etienne, France\\}
}
% make the title area
\maketitle
\begin{abstract}
Reflectance Confocal Microscopy is an imaging modality increasingly used for diagnosis of skin pathologies in clinical context thanks to specific and rich information they provide. However, few studies apply automatic methods for prediction in this kind of images. In this paper, we investigate in this paper a classification on these images on three categories: Healthy, Benign and Malignant Lentigo. To this end, we implement three feature extraction methods, namely Wavelets, Haralick and CNN through Transfer Learning. Furthermore, we exploit these feature extraction within two approaches: the first one operates on the entire image and the second one operates at patch-level (multiple patches per image) by giving a score to each patch. The scores are merged later to build a final decision for an image. Results show that Transfer learning obtains the best results for the two approaches, particularly with Average pooling.
\end{abstract}
\begin{IEEEkeywords}
dermatology, classification, lentigo, Reflectance Confocal Microscopy
\end{IEEEkeywords}
\IEEEpeerreviewmaketitle
\input{content/article/introduction}
\input{content/article/methods}
\input{content/article/results}
\input{content/article/conclusion}
\section*{Aknowledgements}
This research was supported by the Conseil Regional de Bourgogne Franche-Comte, France and the European Regional Development Fund (ERDF).\par
We thank Dr. Perrot and Dr. Cinotti for their work on their dataset and for their permission to use it.\par
{\small
\printbibliography
}
% that's all folks
\end{document}