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ignore_list
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\/source\/bin\/
\/database\/
read.*from
Reading\ in.*lib
Basic\ usage\:
Reading.*library
Read.*lines.*from.*file
Reading.*file
INSERT\ INTO.*database
Finished.+in [0-9]+ seconds.
time
Time
seconds
library took .+ seconds to load
core.init: command
protocols.jd2.JobDistributor: .+ reported success in [0-9]+ seconds
protocols.jd2.JobDistributor: [0-9]+ jobs considered, [0-9]+ jobs attempted in [0-9]+ seconds
core.init: 'RNG device' seed mode, using
TIMING
core.init.random: RandomGenerator:init: Normal mode, seed=
Rosetta version
svn_version
TIME_STAMP
Warning: Unable to locate database file .*Dunbrack[0-9]+.lib.bin
core.pack.dunbrack.RotamerLibrary: Opening file .* for output.
core.pack.dunbrack.RotamerLibrary: Moving temporary file to .*Dunbrack[0-9]+.lib.bin
core.pack.dunbrack.RotamerLibrary: Reading .*
core.pack.dunbrack.RotamerLibrary: Finished reading Dunbrack Libraries
core.pack.dunbrack.RotamerLibrary: Memory usage:
core.pack.dunbrack.RotamerLibrary: ... with [0-9]+ bytes
core.pack.dunbrack.RotamerLibrary: Total memory on Dunbrack Libraries: [0-9]+ bytes.
core.pack.dunbrack.RotamerLibrary: dunbrack library is out-dated
core.pack.dunbrack.RotamerLibrary: cannot find binary dunbrack library under name
core.pack.dunbrack.RotamerLibrary: Random tempname will be:
current_directory=
reating tricubic splines
core.chemical.ResidueTypeSet: Finished initializing fa_standard residue type set. Created [0-9]+ residue types
core.chemical.ResidueTypeSet: Finished initializing centroid residue type set. Created [0-9]+ residue types
core.mm.MMTorsionLibrary: MM torsion sets added fully assigned: [0-9]+; wildcard: [0-9]+ and [0-9]+ virtual parameter
core.scoring.mm.MMLJEnergyTable: Initializing MM LJ Energy Tables with [0-9]+ atom types
core.mm.MMLJLibrary: MM lj sets added: [0-9]+
core.mm.MMBondAngleLibrary: MM bond angle sets added fully assigned: [0-9]+; wildcard: [0-9]+ and [0-9]+ virtual parameter
Processed a total of .+ significant \(.+ raw\) lines in .+ files
Processing time: .+sec
Found .+ duplicate lines in .+ blocks in .+ files