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environments.yaml
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environments.yaml
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name: NegSampling
channels:
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=4.5=1_gnu
- blas=1.0=mkl
- brotli=1.0.9=he6710b0_2
- ca-certificates=2022.4.26=h06a4308_0
- certifi=2021.10.8=py37h06a4308_2
- cycler=0.11.0=pyhd3eb1b0_0
- dbus=1.13.18=hb2f20db_0
- expat=2.4.4=h295c915_0
- fontconfig=2.13.1=h6c09931_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.11.0=h70c0345_0
- giflib=5.2.1=h7b6447c_0
- glib=2.69.1=h4ff587b_1
- gst-plugins-base=1.14.0=h8213a91_2
- gstreamer=1.14.0=h28cd5cc_2
- icu=58.2=he6710b0_3
- intel-openmp=2021.4.0=h06a4308_3561
- jpeg=9e=h7f8727e_0
- kiwisolver=1.3.2=py37h295c915_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.35.1=h7274673_9
- libffi=3.3=he6710b0_2
- libgcc-ng=9.3.0=h5101ec6_17
- libgomp=9.3.0=h5101ec6_17
- libpng=1.6.37=hbc83047_0
- libstdcxx-ng=9.3.0=hd4cf53a_17
- libtiff=4.2.0=h85742a9_0
- libuuid=1.0.3=h7f8727e_2
- libwebp=1.2.2=h55f646e_0
- libwebp-base=1.2.2=h7f8727e_0
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.12=h03d6c58_0
- lz4-c=1.9.3=h295c915_1
- matplotlib=3.5.1=py37h06a4308_1
- matplotlib-base=3.5.1=py37ha18d171_1
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py37h7f8727e_0
- mkl_fft=1.3.1=py37hd3c417c_0
- mkl_random=1.2.2=py37h51133e4_0
- munkres=1.1.4=py_0
- ncurses=6.3=h7f8727e_2
- numpy-base=1.21.5=py37hf524024_2
- openssl=1.1.1n=h7f8727e_0
- packaging=21.3=pyhd3eb1b0_0
- pcre=8.45=h295c915_0
- pillow=9.0.1=py37h22f2fdc_0
- pip=21.2.2=py37h06a4308_0
- pyqt=5.9.2=py37h05f1152_2
- python=3.7.11=h12debd9_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- qt=5.9.7=h5867ecd_1
- readline=8.1.2=h7f8727e_1
- setuptools=58.0.4=py37h06a4308_0
- sip=4.19.8=py37hf484d3e_0
- six=1.16.0=pyhd3eb1b0_1
- sqlite=3.38.0=hc218d9a_0
- tk=8.6.11=h1ccaba5_0
- tornado=6.1=py37h27cfd23_0
- wheel=0.37.1=pyhd3eb1b0_0
- xz=5.2.5=h7b6447c_0
- zlib=1.2.11=h7f8727e_4
- zstd=1.4.9=haebb681_0
- pip:
- aiohttp==3.8.1
- aiosignal==1.2.0
- async-timeout==4.0.2
- asynctest==0.13.0
- attrs==21.4.0
- boto3==1.21.18
- botocore==1.24.18
- cached-property==1.5.2
- cffi==1.15.0
- chardet==4.0.0
- charset-normalizer==2.0.12
- datasets==1.18.4
- dill==0.3.4
- fast-ctc-decode==0.3.0
- filelock==3.6.0
- flatbuffers==2.0
- frozenlist==1.3.0
- fsspec==2022.2.0
- h5py==3.6.0
- huggingface-hub==0.4.0
- idna==2.10
- importlib-metadata==4.11.2
- jmespath==0.10.0
- joblib==1.1.0
- mappy==2.24
- multidict==6.0.2
- multiprocess==0.70.12.2
- numpy==1.19.5
- onnx==1.11.0
- onnxruntime==1.10.0
- ont-bonito-cuda111==0.5.1
- ont-fast5-api==3.3.0
- ont-koi==0.0.7
- ont-remora==0.1.2
- pandas==1.1.5
- parasail==1.2
- progressbar33==2.4
- protobuf==3.19.4
- pyarrow==7.0.0
- pycparser==2.21
- pyparsing==3.0.7
- pysam==0.18.0
- pytorch-pretrained-bert==0.6.2
- pytz==2021.3
- pyyaml==6.0
- regex==2022.3.2
- requests==2.25.1
- responses==0.18.0
- s3transfer==0.5.2
- scikit-learn==1.0.2
- scipy==1.5.4
- tabulate==0.8.9
- thop==0.0.31-2005241907
- threadpoolctl==3.1.0
- toml==0.10.2
- torch==1.10.0+cu111
- tqdm==4.31.1
- typing-extensions==4.1.1
- urllib3==1.26.8
- xxhash==3.0.0
- yarl==1.7.2
- zipp==3.7.0
prefix: /home/ssz/miniconda3/envs/NegSampling