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DESCRIPTION
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DESCRIPTION
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Type: Package
Package: cellPixels
Title: Detect nuclei (and cells) and count pixel intensities in these regions
Version: 0.2.11
Authors@R:
person("Kai", "Budde-Sagert", , "kai.budde-sagert@uni-rostock.de", role = c("aut", "cre"),
comment = c(ORCID = "0000-0001-6836-9865"))
Maintainer: Kai Budde-Sagert <kai.budde-sagert@uni-rostock.de>
Description: The package loads fluorescence microscopy images, detects
the nuclei (and cells) and returns statitics on the pixels within and
outside of the nuclei.
License: GPL-3 + file LICENSE
URL: https://github.com/SFB-ELAINE/cellPixels
BugReports: https://github.com/SFB-ELAINE/cellPixels/issues
Depends:
R (>= 4.0.0)
Imports:
BiocManager (>= 1.30.19),
dplyr (>= 1.0.10),
EBImage (>= 4.40.0),
readCzi (>= 0.4.0),
reticulate (>= 1.26),
tiff (>= 0.1-11)
Remotes:
bioc::EBImage,
github::SFB-ELAINE/readCzi@v0.4.1
ByteCompile: TRUE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
NeedsCompilation: no