Dockerfile

FROM ubuntu:16.04

# settings
ENV DEBIAN_FRONTEND noninteractive
ENV LANG=C.UTF-8
ENV JAVA_HOME /usr/lib/jvm/java-8-openjdk-amd64

RUN apt update \
    # Install runtime dependencies
    && apt install -y openjdk-8-jdk ant unzip wget curl cpanminus git graphviz maven subversion python vim \
    # Install Python 3
    && apt install -y python3-pip python3-dev \
    && cd /usr/local/bin \
    && ln -s /usr/bin/python3 python3 \
    && pip3 install --upgrade pip

RUN mkdir -p /apiarty/tools

WORKDIR /apiarty
ENV PATH=/apiarty/apiarty.bin:${PATH}

RUN \
    rm /root/.bashrc \
    && ln -s /apiarty/apiarty.bin/bashrc /root/.bashrc

### TOOLS ###
# The following installation instructions can be also found in the GitHub repos of the tools themselves.

# Install Nopol and its dependencies
WORKDIR /CoCoSpoon
RUN git clone https://github.com/SpoonLabs/CoCoSpoon.git /CoCoSpoon \
    && mvn clean install

WORKDIR /nopol
RUN git clone https://github.com/SpoonLabs/nopol.git /nopol \
    && cd nopol \
    && mvn package -DskipTests

# Install Arja and its dependencies
WORKDIR /arja
RUN git clone https://github.com/yyxhdy/arja.git /arja \
    && mkdir bin \
    && javac -cp lib/*: -d bin $(find src -name '*.java') \
    && cd external \
    && rm -r bin \
    && mkdir bin \
    && javac -cp lib/*: -d bin $(find src -name '*.java')

# Install NPEFix and its dependencies
WORKDIR /npefix
RUN git clone https://github.com/Spirals-Team/npefix/ /npefix \
    && mvn install

# Install Astor and its dependencies (1st installation option)
WORKDIR /astor
RUN git clone https://github.com/SpoonLabs/astor.git /astor \
    && mvn package -DskipTests=true

# Install Avatar
WORKDIR /avatar
RUN git clone https://github.com/SerVal-DTF/AVATAR.git \
    && cd /avatar/AVATAR \
    && mkdir D4J \
    && cd D4J \
    && mkdir Defects4JData \
    && git clone https://github.com/rjust/defects4j.git \
    && cd defects4j \
    && cpanm --installdeps . \
    && ./init.sh

# Install TBar
WORKDIR /tbar
RUN git clone https://github.com/SerVal-DTF/TBar.git \
    && cd /tbar/TBar \
    && cd D4J \
    && git clone https://github.com/rjust/defects4j.git \
    && cd defects4j \
    && cpanm --installdeps . \
    && ./init.sh
  
# Install SimFix
WORKDIR /simfix
RUN git clone https://github.com/xgdsmileboy/SimFix.git \
    && cd /simfix/SimFix/sbfl/ \
    && mkdir projects \
    && git clone https://github.com/rjust/defects4j.git \
    && cd defects4j \
    && cpanm --installdeps . \
    && ./init.sh

WORKDIR /apiarty

COPY . .
CMD ["bash"]