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Marius Staring edited this page Mar 28, 2018 · 11 revisions

Welcome to the elastix wiki!

elastix is a toolbox for rigid and nonrigid registration of (medical) images.

elastix is open source software, based on the well-known Insight Segmentation and Registration Toolkit (ITK). The software consists of a collection of algorithms that are commonly used to solve (medical) image registration problems. The modular design of elastix allows the user to quickly configure, test, and compare different registration methods for a specific application. A command-line interface enables automated processing of large numbers of data sets, by means of scripting. Nowadays elastix is accompanied by SimpleElastix, making it available in languages like C++, Python, Java, R, Ruby, C# and Lua.

The lead developers of elastix are Stefan Klein and Marius Staring.

proposed TOC

This wiki currently contains some random information that may be useful. We may want to move the website here.

  • Home
  • Download binary releases
  • News
  • About
    • What does elastix do (see also manual)
    • How to use elastix (point to manual and SimpleElastix)
    • Pointer to parameter file database
    • Authors
    • How to cite elastix
    • elastix usage
      • A list of papers that use or cite elastix
      • black duck for project statistics
    • Acknowledgements
  • Do you have questions?
    • manual
    • FAQ
    • mailing list
  • Legal stuff
  • Technical Documentation
    • doxygen
    • code structure
    • software ecosystem (github, how to contribute, cdash nightly dashboard, Travis-CI)
  • Random stuff
    • Additional tools
      • Atlas generation
      • MeVisLab interface
    • Memory consumption transformix

A list of papers that use or cite elastix

Click here to search on Google Scholar (TM) for papers that mention elastix, or here for Google Scholar (TM) citations.