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train_cat.py
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train_cat.py
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#!/usr/bin/env python
# coding=utf-8
# Copyright 2020 The HuggingFace Inc. team. All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Training early and meta classifiers on top of a pre-trained Transformer.
Modified from: https://github.com/huggingface/transformers/blob/master/examples/text-classification/run_glue.py
"""
import logging
import os
import random
import sys
import torch
from dataclasses import dataclass, field
from typing import Optional
from copy import deepcopy
import numpy as np
from datasets import load_dataset, load_metric
import transformers
from transformers import (
AutoConfig,
AutoModelForSequenceClassification,
AutoTokenizer,
DataCollatorWithPadding,
EvalPrediction,
HfArgumentParser,
PretrainedConfig,
Trainer,
TrainingArguments,
default_data_collator,
set_seed,
AdamW,
)
from transformers.trainer_utils import get_last_checkpoint, is_main_process
from transformers.utils import check_min_version
from src.modeling import AlbertWithEarlyExits, ModelArguments
from src.utils import write_predictions, ECELoss
@dataclass
class EarlyTrainingArguments(TrainingArguments):
do_test: bool = field(
default=False, metadata={"help": "Run evaluation on test set (needs labels)"}
)
do_predict_eval: bool = field(
default=False, metadata={"help": "Get prediction for evaluation set"}
)
scaling_iterations: int = field(
default=None, metadata={"help": "Number of iterations for temp scaling (None->training)"}
)
meta_iterations: int = field(
default=None, metadata={"help": "Number of iterations for meta training (None->training)"}
)
meta_learning_rate: float = field(
default=None, metadata={"help": "Learning rate for the meta training (None->learning_rate)."}
)
# Will error if the minimal version of Transformers is not installed. Remove at your own risks.
check_min_version("4.5.0")
task_to_keys = {
"cola": ("sentence", None),
"mnli": ("premise", "hypothesis"),
"mrpc": ("sentence1", "sentence2"),
"qnli": ("question", "sentence"),
"qqp": ("question1", "question2"),
"rte": ("sentence1", "sentence2"),
"sst2": ("sentence", None),
"stsb": ("sentence1", "sentence2"),
"wnli": ("sentence1", "sentence2"),
}
logger = logging.getLogger(__name__)
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
Using `HfArgumentParser` we can turn this class
into argparse arguments to be able to specify them on
the command line.
"""
task_name: Optional[str] = field(
default=None,
metadata={"help": "The name of the task to train on: " + ", ".join(task_to_keys.keys())},
)
max_seq_length: int = field(
default=128,
metadata={
"help": "The maximum total input sequence length after tokenization. Sequences longer "
"than this will be truncated, sequences shorter will be padded."
},
)
overwrite_cache: bool = field(
default=False, metadata={"help": "Overwrite the cached preprocessed datasets or not."}
)
pad_to_max_length: bool = field(
default=True,
metadata={
"help": "Whether to pad all samples to `max_seq_length`. "
"If False, will pad the samples dynamically when batching to the maximum length in the batch."
},
)
max_train_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of training examples to this "
"value if set."
},
)
max_val_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of validation examples to this "
"value if set."
},
)
max_test_samples: Optional[int] = field(
default=None,
metadata={
"help": "For debugging purposes or quicker training, truncate the number of test examples to this "
"value if set."
},
)
early_train_file: str = field(
default=None, metadata={"help": "Path to file with training data for early classifiers"}
)
early_scaling_file: str = field(
default=None, metadata={"help": "Path to file with data for temperature scaling"}
)
early_meta_file: str = field(
default=None, metadata={"help": "Path to file with data training the meta classifier"}
)
validation_file: Optional[str] = field(
default=None, metadata={"help": "A csv or a json file containing the validation data."}
)
test_file: Optional[str] = field(default=None, metadata={"help": "A csv or a json file containing the test data."})
def __post_init__(self):
if self.task_name is not None:
self.task_name = self.task_name.lower()
if self.task_name not in task_to_keys.keys():
raise ValueError("Unknown task, you should pick one in " + ",".join(task_to_keys.keys()))
elif self.early_train_file is None or self.validation_file is None:
raise ValueError("Need either a GLUE task or a training/validation file.")
else:
train_extension = self.early_train_file.split(".")[-1]
assert train_extension in ["csv", "json"], "`early_train_file` should be a csv or a json file."
validation_extension = self.validation_file.split(".")[-1]
assert (
validation_extension == train_extension
), "`validation_file` should have the same extension (csv or json) as `early_train_file`."
def main():
# See all possible arguments in src/transformers/training_args.py
# or by passing the --help flag to this script.
# We now keep distinct sets of args, for a cleaner separation of concerns.
parser = HfArgumentParser((ModelArguments, DataTrainingArguments, EarlyTrainingArguments))
if len(sys.argv) == 2 and sys.argv[1].endswith(".json"):
# If we pass only one argument to the script and it's the path to a json file,
# let's parse it to get our arguments.
model_args, data_args, training_args = parser.parse_json_file(json_file=os.path.abspath(sys.argv[1]))
else:
model_args, data_args, training_args = parser.parse_args_into_dataclasses()
# Detecting last checkpoint.
last_checkpoint = None
# Setup logging
logging.basicConfig(
format="%(asctime)s - %(levelname)s - %(name)s - %(message)s",
datefmt="%m/%d/%Y %H:%M:%S",
handlers=[logging.StreamHandler(sys.stdout)],
)
logger.setLevel(logging.INFO if is_main_process(training_args.local_rank) else logging.WARN)
formatter = logging.Formatter("%(asctime)s - %(levelname)s - %(name)s - %(message)s", datefmt="%m/%d/%Y %H:%M:%S")
os.makedirs(training_args.output_dir, exist_ok=True)
fh = logging.FileHandler(os.path.join(training_args.output_dir, 'log.txt'))
logging.getLogger("transformers").setLevel(logging.INFO)
fh.setFormatter(formatter)
logging.getLogger("transformers").addHandler(fh)
logging.root.addHandler(fh)
# Log on each process the small summary:
logger.warning(
f"Process rank: {training_args.local_rank}, device: {training_args.device}, n_gpu: {training_args.n_gpu}"
+ f"distributed training: {bool(training_args.local_rank != -1)}, 16-bits training: {training_args.fp16}"
)
# Set the verbosity to info of the Transformers logger (on main process only):
if is_main_process(training_args.local_rank):
transformers.utils.logging.set_verbosity_info()
transformers.utils.logging.enable_default_handler()
transformers.utils.logging.enable_explicit_format()
logger.info(f"Training/evaluation parameters {training_args}")
# Set seed before initializing model.
set_seed(training_args.seed)
# Loading a dataset from your local files.
# CSV/JSON training and evaluation files are needed.
data_files = {
"train": data_args.early_train_file,
"validation": data_args.validation_file,
}
if data_args.early_scaling_file:
data_files["scale"] = data_args.early_scaling_file
if data_args.early_meta_file:
data_files["meta"] = data_args.early_meta_file
# Get the test dataset: you can provide your own CSV/JSON test file (see below)
# when you use `do_predict` without specifying a GLUE benchmark task.
if training_args.do_predict or training_args.do_test:
if data_args.test_file is not None:
train_extension = data_args.early_train_file.split(".")[-1]
test_extension = data_args.test_file.split(".")[-1]
assert (
test_extension == train_extension
), "`test_file` should have the same extension (csv or json) as `early_train_file`."
data_files["test"] = data_args.test_file
else:
raise ValueError("Need either a GLUE task or a test file for `do_predict`.")
for key in data_files.keys():
logger.info(f"load a local file for {key}: {data_files[key]}")
if data_args.early_train_file.endswith(".csv"):
# Loading a dataset from local csv files
datasets = load_dataset("csv", data_files=data_files)
else:
# Loading a dataset from local json files
datasets = load_dataset("json", data_files=data_files, field="data")
# See more about loading any type of standard or custom dataset at
# https://huggingface.co/docs/datasets/loading_datasets.html.
# Labels
if data_args.task_name is not None:
is_regression = data_args.task_name == "stsb"
if not is_regression:
label_list = datasets["train"].features["label"].names
num_labels = len(label_list)
else:
num_labels = 1
else:
# Trying to have good defaults here, don't hesitate to tweak to your needs.
is_regression = datasets["train"].features["label"].dtype in ["float32", "float64"]
if is_regression:
num_labels = 1
else:
# A useful fast method:
# https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.unique
label_list = datasets["train"].unique("label")
label_list.sort() # Let's sort it for determinism
num_labels = len(label_list)
# Load pretrained model and tokenizer
#
# In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently
# download model & vocab.
config = AutoConfig.from_pretrained(
model_args.config_name if model_args.config_name else model_args.model_name_or_path,
num_labels=num_labels,
finetuning_task=data_args.task_name,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
config.use_history_logits = model_args.use_history_logits
config.use_early_poolers = model_args.use_early_poolers
config.use_consistency_loss = model_args.use_consistency_loss
config.use_meta_predictors = model_args.use_meta_predictors
config.joint_meta = model_args.joint_meta
config.shared_meta = model_args.shared_meta
config.early_pooler_hidden_size = model_args.early_pooler_hidden_size
config.regression_tolerance = model_args.regression_tolerance
tokenizer = AutoTokenizer.from_pretrained(
model_args.tokenizer_name if model_args.tokenizer_name else model_args.model_name_or_path,
cache_dir=model_args.cache_dir,
use_fast=model_args.use_fast_tokenizer,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
model = AlbertWithEarlyExits.from_pretrained(
model_args.model_name_or_path,
from_tf=bool(".ckpt" in model_args.model_name_or_path),
config=config,
cache_dir=model_args.cache_dir,
revision=model_args.model_revision,
use_auth_token=True if model_args.use_auth_token else None,
)
# Preprocessing the datasets
if data_args.task_name is not None:
sentence1_key, sentence2_key = task_to_keys[data_args.task_name]
else:
# Again, we try to have some nice defaults but don't hesitate to tweak to your use case.
non_label_column_names = [name for name in datasets["train"].column_names if name != "label"]
if "sentence1" in non_label_column_names and "sentence2" in non_label_column_names:
sentence1_key, sentence2_key = "sentence1", "sentence2"
else:
if len(non_label_column_names) >= 2:
sentence1_key, sentence2_key = non_label_column_names[:2]
else:
sentence1_key, sentence2_key = non_label_column_names[0], None
# Padding strategy
if data_args.pad_to_max_length:
padding = "max_length"
else:
# We will pad later, dynamically at batch creation, to the max sequence length in each batch
padding = False
# Some models have set the order of the labels to use, so let's make sure we do use it.
label_to_id = None
if (
model.config.label2id != PretrainedConfig(num_labels=num_labels).label2id
and data_args.task_name is not None
and not is_regression
):
# Some have all caps in their config, some don't.
label_name_to_id = {k.lower(): v for k, v in model.config.label2id.items()}
if list(sorted(label_name_to_id.keys())) == list(sorted(label_list)):
label_to_id = {i: int(label_name_to_id[label_list[i]]) for i in range(num_labels)}
else:
logger.warn(
"Your model seems to have been trained with labels, but they don't match the dataset: ",
f"model labels: {list(sorted(label_name_to_id.keys()))}, dataset labels: {list(sorted(label_list))}."
"\nIgnoring the model labels as a result.",
)
elif data_args.task_name is None and not is_regression:
label_to_id = {v: i for i, v in enumerate(label_list)}
if data_args.max_seq_length > tokenizer.model_max_length:
logger.warn(
f"The max_seq_length passed ({data_args.max_seq_length}) is larger than the maximum length for the"
f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}."
)
max_seq_length = min(data_args.max_seq_length, tokenizer.model_max_length)
def preprocess_function(examples):
# Tokenize the texts
args = (
(examples[sentence1_key],) if sentence2_key is None else (examples[sentence1_key], examples[sentence2_key])
)
result = tokenizer(*args, padding=padding, max_length=max_seq_length, truncation=True)
# Map labels to IDs (not necessary for GLUE tasks)
if label_to_id is not None and "label" in examples:
result["label"] = [(label_to_id[l] if l != -1 else -1) for l in examples["label"]]
return result
datasets = datasets.map(preprocess_function, batched=True, load_from_cache_file=not data_args.overwrite_cache)
if training_args.do_train:
if "train" not in datasets:
raise ValueError("--do_train requires a train dataset")
train_dataset = datasets["train"]
if data_args.max_train_samples is not None:
train_dataset = train_dataset.select(range(data_args.max_train_samples))
if training_args.do_eval:
if "validation" not in datasets and "validation_matched" not in datasets:
raise ValueError("--do_eval requires a validation dataset")
eval_dataset = datasets["validation_matched" if data_args.task_name == "mnli" else "validation"]
if data_args.max_val_samples is not None:
eval_dataset = eval_dataset.select(range(data_args.max_val_samples))
if training_args.do_predict or data_args.task_name is not None or data_args.test_file is not None:
if "test" not in datasets and "test_matched" not in datasets:
raise ValueError("--do_predict requires a test dataset")
test_dataset = datasets["test_matched" if data_args.task_name == "mnli" else "test"]
if data_args.max_test_samples is not None:
test_dataset = test_dataset.select(range(data_args.max_test_samples))
# Log a few random samples from the training set:
if training_args.do_train:
for index in random.sample(range(len(train_dataset)), 3):
logger.info(f"Sample {index} of the training set: {train_dataset[index]}.")
# Get the metric function
if data_args.task_name is not None:
metric = load_metric("glue", data_args.task_name)
else:
metric = load_metric("accuracy")
# You can define your custom compute_metrics function. It takes an `EvalPrediction` object (a namedtuple with a
# predictions and label_ids field) and has to return a dictionary string to float.
def compute_metrics_fn(p: EvalPrediction):
meta_logits = None
ece_measure = ECELoss()
if type(p.predictions) is tuple:
cls_logits = p.predictions[0]
meta_logits = p.predictions[1]
else:
cls_logits = p.predictions
top_preds = np.squeeze(cls_logits[:,-1,:]) if is_regression else np.argmax(cls_logits[:,-1,:], axis=1)
ece = ece_measure(torch.Tensor(cls_logits[:,-1,:]), torch.Tensor(p.label_ids))
metrics = {"ece": ece.item()}
result = metric.compute(predictions=top_preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
for key, value in result.items():
metrics[key] = value
for i in range(cls_logits.shape[1] - 1):
preds = np.squeeze(cls_logits[:,i,:]) if is_regression else np.argmax(cls_logits[:,i,:], axis=1)
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
for key, value in result.items():
metrics[f"{key}_{i}"] = value
ece = ece_measure(torch.Tensor(cls_logits[:,i,:]), torch.Tensor(p.label_ids))
metrics[f"ece_{i}"] = ece.item()
consistency = (preds == top_preds).mean()
metrics[f"consistency_{i}"] = consistency
if meta_logits is not None:
meta_labels = np.equal(preds, top_preds).astype(int)
meta_preds = np.argmax(meta_logits[:,i,:], axis=-1)
meta_acc = (meta_preds == meta_labels).mean()
metrics[f"meta_accuracy_{i}"] = meta_acc
return metrics
def compute_metrics(p: EvalPrediction):
# TODO: copy metric (especially regression to other function)
preds = p.predictions[0] if isinstance(p.predictions, tuple) else p.predictions
preds = np.squeeze(preds) if is_regression else np.argmax(preds, axis=1)
if data_args.task_name is not None:
result = metric.compute(predictions=preds, references=p.label_ids)
if len(result) > 1:
result["combined_score"] = np.mean(list(result.values())).item()
return result
elif is_regression:
return {"mse": ((preds - p.label_ids) ** 2).mean().item()}
else:
return {"accuracy": (preds == p.label_ids).astype(np.float32).mean().item()}
# Data collator will default to DataCollatorWithPadding, so we change it if we already did the padding.
if data_args.pad_to_max_length:
data_collator = default_data_collator
elif training_args.fp16:
data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=8)
else:
data_collator = None
# Initialize our Trainer
trainer = Trainer(
model=model,
args=training_args,
train_dataset=train_dataset if training_args.do_train else None,
eval_dataset=eval_dataset if training_args.do_eval else None,
compute_metrics=compute_metrics_fn,
tokenizer=tokenizer,
data_collator=data_collator,
)
# Training
if training_args.do_train:
checkpoint = None
train_result = trainer.train(resume_from_checkpoint=None)
metrics = train_result.metrics
max_train_samples = (
data_args.max_train_samples if data_args.max_train_samples is not None else len(train_dataset)
)
metrics["train_samples"] = min(max_train_samples, len(train_dataset))
if data_args.early_scaling_file:
trainer.save_model(os.path.join(training_args.output_dir, "pre_scaling"))
if trainer.is_world_process_zero():
tokenizer.save_pretrained(os.path.join(training_args.output_dir, "pre_scaling"))
if training_args.do_eval:
logger.info("*** Evaluate before scaling***")
output_eval_file = os.path.join(
training_args.output_dir, "pre_scaling", f"eval_results.txt"
)
eval_result = trainer.evaluate(eval_dataset=eval_dataset)
if trainer.is_world_process_zero():
with open(output_eval_file, "w") as writer:
logger.info("***** Eval results before scaling *****")
for key, value in eval_result.items():
logger.info(" %s = %s", key, value)
writer.write("%s = %s\n" % (key, value))
else:
trainer.save_model() # Saves the tokenizer too for easy upload
if trainer.is_world_process_zero():
tokenizer.save_pretrained(training_args.output_dir)
trainer.log_metrics("train", metrics)
trainer.save_metrics("train", metrics)
trainer.save_state()
# Temperature scaling
if data_args.early_scaling_file:
logger.info("*** Scaling temperatures ***")
scaling_dataset = datasets["scale"]
model.temp_scaling_mode = True
optimizer = AdamW([model.early_temperatures], lr=0.001)
scaling_args = deepcopy(training_args)
if training_args.scaling_iterations is not None:
scaling_args.max_steps = training_args.scaling_iterations
scaling_args.save_steps = training_args.scaling_iterations
scaling_args.fp16 = False
trainer = Trainer(
model=model,
args=scaling_args,
optimizers=(optimizer, None),
train_dataset=scaling_dataset,
compute_metrics=compute_metrics_fn
)
train_results = trainer.train()
metrics = train_results.metrics
logger.info(metrics)
trainer.save_model()
if trainer.is_world_process_zero():
tokenizer.save_pretrained(training_args.output_dir)
# Train the meta predictors
if data_args.early_meta_file:
logger.info("*** Training meta predictors ***")
meta_dataset = datasets["meta"]
assert model.use_meta_predictors
model.temp_scaling_mode = False
model.meta_training_mode = True
meta_args = deepcopy(training_args)
if training_args.scaling_iterations is not None:
meta_args.max_steps = training_args.meta_iterations
meta_args.save_steps = training_args.meta_iterations
if training_args.meta_learning_rate is not None:
meta_args.learning_rate = training_args.meta_learning_rate
trainer = Trainer(
model=model,
args=meta_args,
train_dataset=meta_dataset,
compute_metrics=compute_metrics_fn
)
train_results = trainer.train()
metrics = train_results.metrics
logger.info(metrics)
trainer.save_model()
if trainer.is_world_process_zero():
tokenizer.save_pretrained(training_args.output_dir)
if model.use_meta_predictors:
trainer = Trainer(
model=model,
args=training_args,
compute_metrics=compute_metrics_fn
)
model.meta_eval_mode = True
# Evaluation
if training_args.do_eval:
logger.info("*** Evaluate ***")
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
eval_datasets = [eval_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
eval_datasets.append(datasets["validation_mismatched"])
for eval_dataset, task in zip(eval_datasets, tasks):
metrics = trainer.evaluate(eval_dataset=eval_dataset)
max_val_samples = data_args.max_val_samples if data_args.max_val_samples is not None else len(eval_dataset)
metrics["eval_samples"] = min(max_val_samples, len(eval_dataset))
trainer.log_metrics("eval", metrics)
trainer.save_metrics("eval", metrics)
if training_args.do_predict_eval:
logger.info("Predicting for validation")
predictions = trainer.predict(test_dataset=eval_dataset).predictions
meta_logits = None
if type(predictions) is tuple:
cls_logits = predictions[0]
meta_logits = predictions[1]
else:
cls_logits = predictions[0]
output_pred_file = os.path.join(
training_args.output_dir, f"eval_preds.jsonl"
)
gold_labels = [ex["label"] for ex in eval_dataset]
write_predictions(cls_logits, meta_logits, model.config.id2label, gold_labels, output_pred_file)
if training_args.do_test or training_args.do_predict:
logger.info("*** Test ***")
# Loop to handle MNLI double evaluation (matched, mis-matched)
tasks = [data_args.task_name]
test_datasets = [test_dataset]
if data_args.task_name == "mnli":
tasks.append("mnli-mm")
test_datasets.append(datasets["test_mismatched"])
for test_dataset, task in zip(test_datasets, tasks):
# Removing the `label` columns because it contains -1 and Trainer won't like that.
# Let's assume we have gold lablels for test for now.
#test_dataset.remove_columns_("label")
if training_args.do_predict:
logger.info("Predicting for %s test", task)
predictions = trainer.predict(test_dataset=test_dataset).predictions
#predictions = np.squeeze(predictions) if is_regression else np.argmax(predictions, axis=1)
meta_logits = None
if type(predictions) is tuple:
cls_logits = predictions[0]
meta_logits = predictions[1]
else:
cls_logits = predictions[0]
output_pred_file = os.path.join(
training_args.output_dir, f"test_preds_{task}.jsonl"
)
gold_labels = [ex["label"] for ex in test_dataset]
write_predictions(cls_logits, meta_logits, model.config.id2label, gold_labels, output_pred_file)
if training_args.do_test:
# TODO: Use predictions from do_predict for evaluation.
logger.info("Evaluating on %s", task)
eval_result = trainer.evaluate(eval_dataset=test_dataset)
output_eval_file = os.path.join(
training_args.output_dir, f"test_results_{task}.txt"
)
if trainer.is_world_process_zero():
if training_args.do_test:
with open(output_eval_file, "w") as writer:
logger.info("***** Test results {} *****".format(task))
for key, value in eval_result.items():
logger.info(" %s = %s", key, value)
writer.write("%s = %s\n" % (key, value))
def _mp_fn(index):
# For xla_spawn (TPUs)
main()
if __name__ == "__main__":
main()