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file not found: archive/data/95844640 #62

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Tom-900 opened this issue Aug 5, 2024 · 0 comments
Open

file not found: archive/data/95844640 #62

Tom-900 opened this issue Aug 5, 2024 · 0 comments

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@Tom-900
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Tom-900 commented Aug 5, 2024

Hi!

Thank you for developing this method. When I tried to finetune your model on 50% of the Zheng68K dataset and predict the celltype on the other 50%, there was an error as follows:

Traceback (most recent call last):
File "/lustre/project/Stat/s1155184322/projects/tutorial/scBERT/scbert/predict.py", line 103, in
ckpt = torch.load(path)
File "/users/s1155184322/miniconda3/envs/bert/lib/python3.9/site-packages/torch/serialization.py", line 592, in load
return _load(opened_zipfile, map_location, pickle_module, **pickle_load_args)
File "/users/s1155184322/miniconda3/envs/bert/lib/python3.9/site-packages/torch/serialization.py", line 851, in _load
result = unpickler.load()
File "/users/s1155184322/miniconda3/envs/bert/lib/python3.9/site-packages/torch/serialization.py", line 843, in persistent_load
load_tensor(data_type, size, key, _maybe_decode_ascii(location))
File "/users/s1155184322/miniconda3/envs/bert/lib/python3.9/site-packages/torch/serialization.py", line 831, in load_tensor
storage = zip_file.get_storage_from_record(name, size, dtype).storage()
RuntimeError: [enforce fail at inline_container.cc:222] . file not found: archive/data/95844640

It seems that the checkpoint file is missing or corrupted. I wonder why this happened and hope to get your advice. Thank you very much in advance.

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