Add hack to deal with DAP2 signed byte conversion. #1317

DennisHeimbigner · 2019-02-13T21:38:54Z

re: issue #1316

The DAP2 data model does not have a signed byte type,
but netcdf-3 does have (only) a signed byte type.
So, when converting a netcdf-3 signed byte typed variable to
a DAP2 unsigned byte, the following actions are taken by thredds:

The variable type is marked as DAP2 (unsigned) byte.
A special attribute, "_Unsigned=false" is set for the variable
The corresponding "_FillValue" attribute, if any, is up-converted
to the DAP2 Int16 type in order to hold, with sign, any signed byte
fill value.

On the netcdf-c side, this looks like a fillvalue type mismatch and causes
an error. Instead, the netcdf-c dap2 conversion code needs to recognize
this hack and undo it locally.

So this change looks for the above case, and if found, then it properly
converts the _FillValue type to netcdf-3 signed byte.

Since DAP2 supports both signed and unsigned integers of sizes 16 and 32 bits,
this should be the only hack needed (famous last words).

It may later be desirable for the thredds DAP2 converter to modify its
behavior as well.

re: issue #1316 The DAP2 data model does not have a signed byte type, but netcdf-3 does have (only) a signed byte type. So, when converting a netcdf-3 signed byte typed variable to a DAP2 unsigned byte, the following actions are taken by thredds: 1. The variable type is marked as DAP2 (unsigned) byte. 2. A special attribute, "_Unsigned=false" is set for the variable 3. The corresponding "_FillValue" attribute, if any, is up-converted to the DAP2 Int16 type in order to hold, with sign, any signed byte fill value. On the netcdf-c side, this looks like a fillvalue type mismatch and causes an error. Instead, the netcdf-c dap2 conversion code needs to recognize this hack and undo it locally. So this change looks for the above case, and if found, then it properly converts the _FillValue type to netcdf-3 signed byte. Since DAP2 supports both signed and unsigned integers of sizes 16 and 32 bits, this should be the only hack needed (famous last words). It may later be desirable for the thredds DAP2 converter to modify its behavior as well.

ChrisBarker-NOAA · 2020-02-11T17:40:12Z

@WardF, @DennisHeimbigner:

Ping!

I'm still seeing this issue with:

netcdf library version 4.7.3 of Jan 23 2020 20:10:56 $

(the build on conda-forge, for OS-X)

Here's an example that fails right now:

$ ncdump -h http://eds.ioos.us/thredds/dodsC/ioos/hycom_navy/Navy_HYCOM_best.ncd
ncdump: http://eds.ioos.us/thredds/dodsC/ioos/hycom_navy/Navy_HYCOM_best.ncd: http://eds.ioos.us/thredds/dodsC/ioos/hycom_navy/Navy_HYCOM_best.ncd: NetCDF: Not a valid data type or _FillValue type mismatch

What version did this make it into? it seems it was merged a year ago!

WardF · 2020-02-11T18:39:06Z

I would need to go back and check the release notes to see the version that we began enforcing this. Given the issues surrounding this change, we are discussing reverting it; I suspect we will, but the details need to be nailed down for the next release (which should be soon, if all goes to plan).

In the meantime, I will mention that the following should work for you with 4.7.3:

$ ncdump -h [FillMismatch]http://eds.ioos.us/thredds/dodsC/ioos/hycom_navy/Navy_HYCOM_best.ncd

Adding the [FillMismatch] prefix to the url tells netCDF to ignore this error.

ChrisBarker-NOAA · 2020-02-11T20:04:53Z

For the record, that DOES work with the C API via the Python NetCDF4 pacakge:

In [4]: url = '[FillMismatch]http://eds.ioos.us/thredds/dodsC/ioos/hycom_navy/Navy_HYCOM_best.ncd'

In [5]: nc = Dataset(url)

WardF · 2020-02-11T21:38:48Z

Fantastic! The core issue, I think, is that this 'mismatch' case originally appeared to be a corner case that would rarely be encountered. The solution seemed straightforward; enforce the standard[1], add a mechanism to work around it, and move on. In practice, this problem keeps rearing its head, and isn't the rare corner case we originally thought it would be.

I suspect[2] that we will end up relaxing this standard* and updating the documentation, but we need to make sure we have our ducks in a row. The netCDF team meets on Thursday, and I suspect we'll nail this down then.

1: There is now a question about whether this is part of the standard or just a 'best practice'. We will codify this. I have a hard time believing that we would enforce this without it having been a formal part of the standard.
2: I can't speak unilaterally for the team, and it depends on the conversation I have with @DennisHeimbigner and others, but if I were the only one making decisions, this is the direction I would move us in.

ChrisBarker-NOAA · 2020-02-11T21:42:52Z

Thanks!

I know I've ht it multiple times. As for whether it is the Standard or not -- if TDS can't / won't support it, then, well it really can't be the standard :-)

I guess a key question is if the type mismatch actually ever caused any problems?

DennisHeimbigner · 2020-02-11T22:30:49Z

TDS (netcdf-java actually) is known to violate the netcdf-c standards in many ways.

DennisHeimbigner · 2020-02-11T22:38:40Z

The example you give:
http://eds.ioos.us/thredds/dodsC/ioos/hycom_navy/Navy_HYCOM_best.ncd
Fails because the variables are of type Float32, while the FIllValues
are of type Int16.
The relevant PR only attempted to fix the signed byte case. All other
mismatch possibilities were left untouched.
The issue of a more general change is being discussed in Issue
#1614

lesserwhirls · 2020-02-12T00:02:14Z

Any chance we can get a copy of one or two of the underlying netCDF files? The HTTPServer service isn't turned on for that dataset, so I am unable to get a raw file.

ChrisBarker-NOAA · 2020-02-12T00:38:26Z

@DennisHeimbigner: really? mismatch of Float32 and Int16? That sure sounds like a bug or misconfiguration of TDS then.

I don't have anything to do with running that server, but I'll try to point the folks that do to this thread.

@lesserwhirls: I'll see if I can get the folks running that server to join this thread.

lesserwhirls · 2020-02-12T02:58:50Z

I believe what is happening in this case, at least on the server side, is that the level of netCDF-Java at which the opendap server is operating (NetcdfDataset) is applying the scale and offset values to the data and some attributes, but not to the _FillValue attribute specifically.

DennisHeimbigner · 2020-02-12T04:30:13Z

Sean-
I believe you are right.
Is there any documentationthat describes the attributes that are
semantically meaningful and used by netcdf-Java+tds? So far we have:

Unsigned
Offset
Scale

Are there others? I would like to fix them all at one shot.

ChrisBarker-NOAA · 2020-02-13T16:55:55Z

Thanks for all the effort in this!

I haven’t looked into this carefully, but might the Robustness Principal apply here:

"Be conservative in what you send, be liberal in what you accept“
(https://en.m.wikipedia.org/wiki/Robustness_principle)

That is: by default, couldn’t the client simply cast _FillValue (and other attributes) to the variable type?

dopplershift · 2020-02-14T01:34:19Z

@DennisHeimbigner If we know of incompatibilities between netCDF-C and netCDF-java, those really need to be documented somewhere (I’m assuming they’re not already), or even better, turned into issues that we can address. I mean, we make both of these things, incompatibilities should not persist between them—it’s not helping our community.

rsignell-usgs · 2020-02-25T13:14:58Z

Yet another important large dataset plagued by these problems -- the 33 year altimeter-derived global wave data.

Trying to get data from their THREDDS server:

import xarray as xr
import netCDF4
url = 'http://thredds.aodn.org.au/thredds/dodsC/IMOS/SRS/Surface-Waves/Wave-Wind-Altimetry-DM00/JASON-2/040N_280E/IMOS_SRS-Surface-Waves_MW_JASON-2_FV02_040N-287E-DM00.nc'

nc = netCDF4.Dataset(url)

produces:

OSError: [Errno -45] NetCDF: Not a valid data type or _FillValue type mismatch: b'http://thredds.aodn.org.au/thredds/dodsC/IMOS/SRS/Surface-Waves/Wave-Wind-Altimetry-DM00/JASON-2/040N_280E/IMOS_SRS-Surface-Waves_MW_JASON-2_FV02_040N-287E-DM00.nc'

and if we add the hack of prepending '[FillMismatch]' to the URL, netcdf works

nc = netCDF4.Dataset('[FillMismatch]'+url)

but xarray thinks the prepended string is not a URL (I'm guessing because it doesn't start with http?) and fails:

ds = xr.open_dataset('[FillMismatch]'+url)

FileNotFoundError: [Errno 2] No such file or directory: b'/home/jovyan/notebooks/[FillMismatch]http:/thredds.aodn.org.au/thredds/dodsC/IMOS/SRS/Surface-Waves/Wave-Wind-Altimetry-DM00/JASON-2/040N_280E/IMOS_SRS-Surface-Waves_MW_JASON-2_FV02_040N-287E-DM00.nc'

DennisHeimbigner · 2020-02-25T18:39:55Z

You can specify fillmismatch alternately as
<url>#fillmismatch

This might get past the xarray url parser

DennisHeimbigner · 2020-02-25T18:42:07Z

Are you sure about that URL. The current master ncdump
seems to read this correctly.

ChrisBarker-NOAA · 2020-02-27T00:40:39Z

so does 4.7.3 from conda-forge.

that is:

$ ncdump -h http://thredds.aodn.org.au/thredds/dodsC/IMOS/SRS/Surface-Waves/Wave-Wind-Altimetry-DM00/JASON-2/040N_280E/IMOS_SRS-Surface-Waves_MW_JASON-2_FV02_040N-287E-DM00.nc
netcdf IMOS_SRS-Surface-Waves_MW_JASON-2_FV02_040N-287E-DM00 {
dimensions:
	TIME = 2747 ;
variables:
	double TIME(TIME) ;
		TIME:long_name = "time" ;

an it works with Python netCDF4 too, including the UWND variable, which seems to potentially have a type mismatch:

In [8]: uwnd[:]
Out[8]: 
masked_array(data=[--, --, --, ..., 2.2699999809265137,
                   2.2699999809265137, 2.2699999809265137],
             mask=[ True,  True,  True, ..., False, False, False],
       fill_value=-32768,
            dtype=float32)

In [9]:

that is -- it's a float array, with an integer fill_value

dopplershift · 2020-02-27T02:30:55Z

@ChrisBarker-NOAA You need to be careful when viewing it through netCDF4-python, since it likes to automatically apply scale and offset. The CDL from ncdump shows:

	short UWND(TIME) ;
		UWND:_FillValue = -32768s ;
		UWND:long_name = "ECMWF model zonal wind speed" ;
		UWND:standard_name = "eastward_wind" ;
		UWND:units = "m/s" ;
		UWND:coordinates = "TIME LATITUDE LONGITUDE" ;
		UWND:scale_factor = 0.01f ;
		UWND:valid_max = 6000s ;
		UWND:valid_min = 0s ;
		UWND:_ChunkSizes = 2747 ;

so the variable is actually short. This is illustrative of the perils of having tools automatically interpret metadata.

rsignell-usgs · 2020-02-27T03:57:37Z

@DennisHeimbigner , yes, adding as a suffix did the trick!

import xarray as xr

url = 'http://thredds.aodn.org.au/thredds/dodsC/IMOS/SRS/Surface-Waves/Wave-Wind-Altimetry-DM00/JASON-2/040N_280E/IMOS_SRS-Surface-Waves_MW_JASON-2_FV02_040N-287E-DM00.nc'

ds = xr.open_dataset(url+'#fillmismatch')

print(ds)

produces:

<xarray.Dataset>
Dimensions:                  (TIME: 2747)
Coordinates:
  * TIME                     (TIME) datetime64[ns] 2008-07-23T21:27:15.374996096 ... 2019-09-28T17:05:50.984380032
    LATITUDE                 (TIME) float32 ...
    LONGITUDE                (TIME) float32 ...
Data variables:
    BOT_DEPTH                (TIME) float32 ...
    DIST2COAST               (TIME) float32 ...

@ChrisBarker-NOAA , yes, the latest netcdf works, but this workaround is for the latest pangeo-notebook environment, which has an older netcdf because of other dependencies:

libnetcdf                 4.7.3           nompi_h9f9fd6a_101    conda-forge
netcdf4                   1.5.3           nompi_py37hd35fb8e_102    conda-forge

@DennisHeimbigner

Release Notes {#RELEASE_NOTES} ============= \brief Release notes file for the netcdf-c package. This file contains a high-level description of this package's evolution. Releases are in reverse chronological order (most recent first). Note that, as of netcdf 4.2, the `netcdf-c++` and `netcdf-fortran` libraries have been separated into their own libraries. ## 4.9.3 - TBD ## 4.9.2 - March 14, 2023 This is the maintenance release which adds support for HDF5 version 1.14.0, in addition to a handful of other changes and bugfixes. * Fix 'make distcheck' error in run_interop.sh. See [Github #????](https://github.com/Unidata/netcdf-c/pull/????). * Update `nc-config` to remove inclusion from automatically-detected `nf-config` and `ncxx-config` files, as the wrong files could be included in the output. This is in support of [GitHub #2274](Unidata/netcdf-c#2274). * Update H5FDhttp.[ch] to work with HDF5 version 1.13.2 and later. See [Github #2635](Unidata/netcdf-c#2635). * [Bug Fix] Update DAP code to enable CURLOPT_ACCEPT_ENCODING by default. See [Github #2630](Unidata/netcdf-c#2630). * [Bug Fix] Fix byterange failures for certain URLs. See [Github #2649](Unidata/netcdf-c#2649). * [Bug Fix] Fix 'make distcheck' error in run_interop.sh. See [Github #2631](Unidata/netcdf-c#2631). * [Enhancement] Update `nc-config` to remove inclusion from automatically-detected `nf-config` and `ncxx-config` files, as the wrong files could be included in the output. This is in support of [GitHub #2274](Unidata/netcdf-c#2274). * [Enhancement] Update H5FDhttp.[ch] to work with HDF5 version 1.14.0. See [Github #2615](Unidata/netcdf-c#2615). ## 4.9.1 - February 2, 2023 ## Known Issues * A test in the `main` branch of `netcdf-cxx4` is broken by this rc; this will bear further investigation, but not being treated as a roadblock for the release candidate. * The new document, `netcdf-c/docs/filter_quickstart.md` is in rough-draft form. * Race conditions exist in some of the tests when run concurrently with large numbers of processors ## What's Changed from v4.9.0 (automatically generated) * Fix nc_def_var_fletcher32 operation by \@DennisHeimbigner in Unidata/netcdf-c#2403 * Merge relevant info updates back into `main` by \@WardF in Unidata/netcdf-c#2387 * Add manual GitHub actions triggers for the tests. by \@WardF in Unidata/netcdf-c#2404 * Use env variable USERPROFILE instead of HOME for windows and mingw. by \@DennisHeimbigner in Unidata/netcdf-c#2405 * Make public a limited API for programmatic access to internal .rc tables by \@DennisHeimbigner in Unidata/netcdf-c#2408 * Fix typo in CMakeLists.txt by \@georgthegreat in Unidata/netcdf-c#2412 * Fix choice of HOME dir by \@DennisHeimbigner in Unidata/netcdf-c#2416 * Check for libxml2 development files by \@WardF in Unidata/netcdf-c#2417 * Updating Doxyfile.in with doxygen-1.8.17, turned on WARN_AS_ERROR, added doxygen build to CI run by \@edwardhartnett in Unidata/netcdf-c#2377 * updated release notes by \@edwardhartnett in Unidata/netcdf-c#2392 * increase read block size from 1 KB to 4 MB by \@wkliao in Unidata/netcdf-c#2319 * fixed RELEASE_NOTES.md by \@edwardhartnett in Unidata/netcdf-c#2423 * Fix pnetcdf tests in cmake by \@WardF in Unidata/netcdf-c#2437 * Updated CMakeLists to avoid corner case cmake error by \@WardF in Unidata/netcdf-c#2438 * Add `--disable-quantize` to configure by \@WardF in Unidata/netcdf-c#2439 * Fix the way CMake handles -DPLUGIN_INSTALL_DIR by \@DennisHeimbigner in Unidata/netcdf-c#2430 * fix and test quantize mode for NC_CLASSIC_MODEL by \@edwardhartnett in Unidata/netcdf-c#2445 * Guard _declspec(dllexport) in support of #2446 by \@WardF in Unidata/netcdf-c#2460 * Ensure that netcdf_json.h does not interfere with ncjson. by \@DennisHeimbigner in Unidata/netcdf-c#2448 * Prevent cmake writing to source dir by \@magnusuMET in Unidata/netcdf-c#2463 * more quantize testing and adding pre-processor constant NC_MAX_FILENAME to nc_tests.h by \@edwardhartnett in Unidata/netcdf-c#2457 * Provide a default enum const when fill value does not match any enum constant by \@DennisHeimbigner in Unidata/netcdf-c#2462 * Fix support for reading arrays of HDF5 fixed size strings by \@DennisHeimbigner in Unidata/netcdf-c#2466 * fix musl build by \@magnusuMET in Unidata/netcdf-c#1701 * Fix AWS SDK linking errors by \@dzenanz in Unidata/netcdf-c#2470 * Address jump-misses-init issue. by \@WardF in Unidata/netcdf-c#2488 * Remove stray merge conflict markers by \@WardF in Unidata/netcdf-c#2493 * Add support for Zarr string type to NCZarr by \@DennisHeimbigner in Unidata/netcdf-c#2492 * Fix some problems with PR 2492 by \@DennisHeimbigner in Unidata/netcdf-c#2497 * Fix some bugs in the blosc filter wrapper by \@DennisHeimbigner in Unidata/netcdf-c#2461 * Add option to control accessing external servers by \@DennisHeimbigner in Unidata/netcdf-c#2491 * Changed attribute case in documentation by \@WardF in Unidata/netcdf-c#2482 * Adding all-error-codes.md back in to distribution documentation. by \@WardF in Unidata/netcdf-c#2501 * Update hdf5 version in github actions. by \@WardF in Unidata/netcdf-c#2504 * Minor update to doxygen function documentation by \@gsjaardema in Unidata/netcdf-c#2451 * Fix some addtional errors in NCZarr by \@DennisHeimbigner in Unidata/netcdf-c#2503 * Cleanup szip handling some more by \@DennisHeimbigner in Unidata/netcdf-c#2421 * Check for zstd development headers in autotools by \@WardF in Unidata/netcdf-c#2507 * Add new options to nc-config by \@WardF in Unidata/netcdf-c#2509 * Cleanup built test sources in nczarr_test by \@DennisHeimbigner in Unidata/netcdf-c#2508 * Fix inconsistency in netcdf_meta.h by \@WardF in Unidata/netcdf-c#2512 * Small fix in nc-config.in by \@WardF in Unidata/netcdf-c#2513 * For loop initial declarations are only allowed in C99 mode by \@gsjaardema in Unidata/netcdf-c#2517 * Fix some dependencies in tst_nccopy3 by \@WardF in Unidata/netcdf-c#2518 * Update plugins/Makefile.am by \@WardF in Unidata/netcdf-c#2519 * Fix prereqs in ncdump/tst_nccopy4 in order to avoid race conditions. by \@WardF in Unidata/netcdf-c#2520 * Move construction of VERSION file to end of the build by \@DennisHeimbigner in Unidata/netcdf-c#2527 * Add draft filter quickstart guide by \@WardF in Unidata/netcdf-c#2531 * Turn off extraneous debug output by \@DennisHeimbigner in Unidata/netcdf-c#2537 * typo fix by \@wkliao in Unidata/netcdf-c#2538 * replace 4194304 with READ_BLOCK_SIZE by \@wkliao in Unidata/netcdf-c#2539 * Rename variable to avoid function name conflict by \@ibaned in Unidata/netcdf-c#2550 * Add Cygwin CI and stop installing unwanted plugins by \@DWesl in Unidata/netcdf-c#2529 * Merge subset of v4.9.1 files back into main development branch by \@WardF in Unidata/netcdf-c#2530 * Add a Filter quickstart guide document by \@WardF in Unidata/netcdf-c#2524 * Fix race condition in ncdump (and other) tests. by \@DennisHeimbigner in Unidata/netcdf-c#2552 * Make dap4 reference dap instead of hard-wired to be disabled. by \@WardF in Unidata/netcdf-c#2553 * Suppress nczarr_test/tst_unknown filter test by \@DennisHeimbigner in Unidata/netcdf-c#2557 * Add fenceposting for HAVE_DECL_ISINF and HAVE_DECL_ISNAN by \@WardF in Unidata/netcdf-c#2559 * Add an old static file. by \@WardF in Unidata/netcdf-c#2575 * Fix infinite loop in file inferencing by \@DennisHeimbigner in Unidata/netcdf-c#2574 * Merge Wellspring back into development branch by \@WardF in Unidata/netcdf-c#2560 * Allow ncdump -t to handle variable length string attributes by \@srherbener in Unidata/netcdf-c#2584 * Fix an issue I introduced with make distcheck by \@WardF in Unidata/netcdf-c#2590 * make UDF0 not require NC_NETCDF4 by \@jedwards4b in Unidata/netcdf-c#2586 * Expose user-facing documentation related to byterange DAP functionality. by \@WardF in Unidata/netcdf-c#2596 * Fix Memory Leak by \@DennisHeimbigner in Unidata/netcdf-c#2598 * CI: Change autotools CI build to out-of-tree build. by \@DWesl in Unidata/netcdf-c#2577 * Update github action configuration scripts. by \@WardF in Unidata/netcdf-c#2600 * Update the filter quickstart guide. by \@WardF in Unidata/netcdf-c#2602 * Fix symbol export on Windows by \@WardF in Unidata/netcdf-c#2604 ## New Contributors * \@georgthegreat made their first contribution in Unidata/netcdf-c#2412 * \@dzenanz made their first contribution in Unidata/netcdf-c#2470 * \@DWesl made their first contribution in Unidata/netcdf-c#2529 * \@srherbener made their first contribution in Unidata/netcdf-c#2584 * \@jedwards4b made their first contribution in Unidata/netcdf-c#2586 **Full Changelog**: Unidata/netcdf-c@v4.9.0...v4.9.1 ### 4.9.1 - Release Candidate 2 - November 21, 2022 #### Known Issues * A test in the `main` branch of `netcdf-cxx4` is broken by this rc; this will bear further investigation, but not being treated as a roadblock for the release candidate. * The new document, `netcdf-c/docs/filter_quickstart.md` is in rough-draft form. #### Changes * [Bug Fix] Fix a race condition when testing missing filters. See [Github #2557](Unidata/netcdf-c#2557). * [Bug Fix] Fix some race conditions due to use of a common file in multiple shell scripts . See [Github #2552](Unidata/netcdf-c#2552). ### 4.9.1 - Release Candidate 1 - October 24, 2022 * [Enhancement][Documentation] Add Plugins Quick Start Guide. See [GitHub #2524](Unidata/netcdf-c#2524) for more information. * [Enhancement] Add new entries in `netcdf_meta.h`, `NC_HAS_BLOSC` and `NC_HAS_BZ2`. See [Github #2511](Unidata/netcdf-c#2511) and [Github #2512](Unidata/netcdf-c#2512) for more information. * [Enhancement] Add new options to `nc-config`: `--has-multifilters`, `--has-stdfilters`, `--has-quantize`, `--plugindir`. See [Github #2509](Unidata/netcdf-c#2509) for more information. * [Bug Fix] Fix some errors detected in PR 2497. [PR #2497](Unidata/netcdf-c#2497) . See [Github #2503](Unidata/netcdf-c#2503). * [Bug Fix] Split the remote tests into two parts: one for the remotetest server and one for all other external servers. Also add a configure option to enable the latter set. See [Github #2491](Unidata/netcdf-c#2491). * [Bug Fix] Fix blosc plugin errors. See [Github #2461](Unidata/netcdf-c#2461). * [Bug Fix] Fix support for reading arrays of HDF5 fixed size strings. See [Github #2466](Unidata/netcdf-c#2466). * [Bug Fix] Fix some errors detected in [PR #2492](Unidata/netcdf-c#2492) . See [Github #2497](Unidata/netcdf-c#2497). * [Enhancement] Add support for Zarr (fixed length) string type in nczarr. See [Github #2492](Unidata/netcdf-c#2492). * [Bug Fix] Split the remote tests into two parts: one for the remotetest server and one for all other external servers. Also add a configure option to enable the latter set. See [Github #2491](Unidata/netcdf-c#2491). * [Bug Fix] Fix support for reading arrays of HDF5 fixed size strings. See [Github #2462](Unidata/netcdf-c#2466). * [Bug Fix] Provide a default enum const when fill value does not match any enum constant for the value zero. See [Github #2462](Unidata/netcdf-c#2462). * [Bug Fix] Fix the json submodule symbol conflicts between libnetcdf and the plugin specific netcdf_json.h. See [Github #2448](Unidata/netcdf-c#2448). * [Bug Fix] Fix quantize with CLASSIC_MODEL files. See [Github #2405](Unidata/netcdf-c#2445). * [Enhancement] Add `--disable-quantize` option to `configure`. * [Bug Fix] Fix CMakeLists.txt to handle all acceptable boolean values for -DPLUGIN_INSTALL_DIR. See [Github #2430](Unidata/netcdf-c#2430). * [Bug Fix] Fix tst_vars3.c to use the proper szip flag. See [Github #2421](Unidata/netcdf-c#2421). * [Enhancement] Provide a simple API to allow user access to the internal .rc file table: supports get/set/overwrite of entries of the form "key=value". See [Github #2408](Unidata/netcdf-c#2408). * [Bug Fix] Use env variable USERPROFILE instead of HOME for windows and mingw. See [Github #2405](Unidata/netcdf-c#2405). * [Bug Fix] Fix the nc_def_var_fletcher32 code in hdf5 to properly test value of the fletcher32 argument. See [Github #2403](Unidata/netcdf-c#2403). ## 4.9.0 - June 10, 2022 * [Enhancement] Add quantize functions nc_def_var_quantize() and nc_inq_var_quantize() to enable lossy compression. See [Github #1548](Unidata/netcdf-c#1548). * [Enhancement] Add zstandard compression functions nc_def_var_zstandard() and nc_inq_var_zstandard(). See [Github #2173](Unidata/netcdf-c#2173). * [Enhancement] Have netCDF-4 logging output one file per processor when used with parallel I/O. See [Github #1762](Unidata/netcdf-c#1762). * [Enhancement] Improve filter installation process to avoid use of an extra shell script. See [Github #2348](Unidata/netcdf-c#2348). * [Bug Fix] Get "make distcheck" to work See [Github #2343](Unidata/netcdf-c#2343). * [Enhancement] Allow the read/write of JSON-valued Zarr attributes to allow for domain specific info such as used by GDAL/Zarr. See [Github #2278](Unidata/netcdf-c#2278). * [Enhancement] Turn on the XArray convention for NCZarr files by default. WARNING, this means that the mode should explicitly specify "nczarr" or "zarr" even if "xarray" or "noxarray" is specified. See [Github #2257](Unidata/netcdf-c#2257). * [Enhancement] Update the documentation to match the current filter capabilities See [Github #2249](Unidata/netcdf-c#2249). * [Enhancement] Update the documentation to match the current filter capabilities. See [Github #2249](Unidata/netcdf-c#2249). * [Enhancement] Support installation of pre-built standard filters into user-specified location. See [Github #2318](Unidata/netcdf-c#2318). * [Enhancement] Improve filter support. More specifically (1) add nc_inq_filter_avail to check if a filter is available, (2) add the notion of standard filters, (3) cleanup szip support to fix interaction with NCZarr. See [Github #2245](Unidata/netcdf-c#2245). * [Enhancement] Switch to tinyxml2 as the default xml parser implementation. See [Github #2170](Unidata/netcdf-c#2170). * [Bug Fix] Require that the type of the variable in nc_def_var_filter is not variable length. See [Github #/2231](Unidata/netcdf-c#2231). * [File Change] Apply HDF5 v1.8 format compatibility when writing to previous files, as well as when creating new files. The superblock version remains at 2 for newly created files. Full backward read/write compatibility for netCDF-4 is maintained in all cases. See [Github #2176](Unidata/netcdf-c#2176). * [Enhancement] Add ability to set dataset alignment for netcdf-4/HDF5 files. See [Github #2206](Unidata/netcdf-c#2206). * [Bug Fix] Improve UTF8 support on windows so that it can use utf8 natively. See [Github #2222](Unidata/netcdf-c#2222). * [Enhancement] Add complete bitgroom support to NCZarr. See [Github #2197](Unidata/netcdf-c#2197). * [Bug Fix] Clean up the handling of deeply nested VLEN types. Marks nc_free_vlen() and nc_free_string as deprecated in favor of ncaux_reclaim_data(). See [Github #2179](Unidata/netcdf-c#2179). * [Bug Fix] Make sure that netcdf.h accurately defines the flags in the open/create mode flags. See [Github #2183](Unidata/netcdf-c#2183). * [Enhancement] Improve support for msys2+mingw platform. See [Github #2171](Unidata/netcdf-c#2171). * [Bug Fix] Clean up the various inter-test dependencies in ncdump for CMake. See [Github #2168](Unidata/netcdf-c#2168). * [Bug Fix] Fix use of non-aws appliances. See [Github #2152](Unidata/netcdf-c#2152). * [Enhancement] Added options to suppress the new behavior from [Github #2135](Unidata/netcdf-c#2135). The options for `cmake` and `configure` are, respectively `-DENABLE_LIBXML2` and `--(enable/disable)-libxml2`. Both of these options defaul to 'on/enabled'. When disabled, the bundled `ezxml` XML interpreter is used regardless of whether `libxml2` is present on the system. * [Enhancement] Support optional use of libxml2, otherwise default to ezxml. See [Github #2135](Unidata/netcdf-c#2135) -- H/T to [Egbert Eich](https://github.com/e4t). * [Bug Fix] Fix several os related errors. See [Github #2138](Unidata/netcdf-c#2138). * [Enhancement] Support byte-range reading of netcdf-3 files stored in private buckets in S3. See [Github #2134](Unidata/netcdf-c#2134) * [Enhancement] Support Amazon S3 access for NCZarr. Also support use of the existing Amazon SDK credentials system. See [Github #2114](Unidata/netcdf-c#2114) * [Bug Fix] Fix string allocation error in H5FDhttp.c. See [Github #2127](Unidata/netcdf-c#2127). * [Bug Fix] Apply patches for ezxml and for selected oss-fuzz detected errors. See [Github #2125](Unidata/netcdf-c#2125). * [Bug Fix] Ensure that internal Fortran APIs are always defined. See [Github #2098](Unidata/netcdf-c#2098). * [Enhancement] Support filters for NCZarr. See [Github #2101](Unidata/netcdf-c#2101) * [Bug Fix] Make PR 2075 long file name be idempotent. See [Github #2094](Unidata/netcdf-c#2094). ## 4.8.1 - August 18, 2021 * [Bug Fix] Fix multiple bugs in libnczarr. See [Github #2066](Unidata/netcdf-c#2066). * [Enhancement] Support windows network paths (e.g. \\svc\...). See [Github #2065](Unidata/netcdf-c#2065). * [Enhancement] Convert to a new representation of the NCZarr meta-data extensions: version 2. Read-only backward compatibility is provided. See [Github #2032](Unidata/netcdf-c#2032). * [Bug Fix] Fix dimension_separator bug in libnczarr. See [Github #2035](Unidata/netcdf-c#2035). * [Bug Fix] Fix bugs in libdap4. See [Github #2005](Unidata/netcdf-c#2005). * [Bug Fix] Store NCZarr fillvalue as a singleton instead of a 1-element array. See [Github #2017](Unidata/netcdf-c#2017). * [Bug Fixes] The netcdf-c library was incorrectly determining the scope of dimension; similar to the type scope problem. See [Github #2012](Unidata/netcdf-c#2012) for more information. * [Bug Fix] Re-enable DAP2 authorization testing. See [Github #2011](Unidata/netcdf-c#2011). * [Bug Fix] Fix bug with windows version of mkstemp that causes failure to create more than 26 temp files. See [Github #1998](Unidata/netcdf-c#1998). * [Bug Fix] Fix ncdump bug when printing VLENs with basetype char. See [Github #1986](Unidata/netcdf-c#1986). * [Bug Fixes] The netcdf-c library was incorrectly determining the scope of types referred to by nc_inq_type_equal. See [Github #1959](Unidata/netcdf-c#1959) for more information. * [Bug Fix] Fix bug in use of XGetopt when building under Mingw. See [Github #2009](Unidata/netcdf-c#2009). * [Enhancement] Improve the error reporting when attempting to use a filter for which no implementation can be found in HDF5_PLUGIN_PATH. See [Github #2000](Unidata/netcdf-c#2000) for more information. * [Bug Fix] Fix `make distcheck` issue in `nczarr_test/` directory. See [Github #2007](Unidata/netcdf-c#2007). * [Bug Fix] Fix bug in NCclosedir in dpathmgr.c. See [Github #2003](Unidata/netcdf-c#2003). * [Bug Fix] Fix bug in ncdump that assumes that there is a relationship between the total number of dimensions and the max dimension id. See [Github #2004](Unidata/netcdf-c#2004). * [Bug Fix] Fix bug in JSON processing of strings with embedded quotes. See [Github #1993](Unidata/netcdf-c#1993). * [Enhancement] Add support for the new "dimension_separator" enhancement to Zarr v2. See [Github #1990](Unidata/netcdf-c#1990) for more information. * [Bug Fix] Fix hack for handling failure of shell programs to properly handle escape characters. See [Github #1989](Unidata/netcdf-c#1989). * [Bug Fix] Allow some primitive type names to be used as identifiers depending on the file format. See [Github #1984](Unidata/netcdf-c#1984). * [Enhancement] Add support for reading/writing pure Zarr storage format that supports the XArray _ARRAY_DIMENSIONS attribute. See [Github #1952](Unidata/netcdf-c#1952) for more information. * [Update] Updated version of bzip2 used in filter testing/functionality, in support of [Github #1969](Unidata/netcdf-c#1969). * [Bug Fix] Corrected HDF5 version detection logic as described in [Github #1962](Unidata/netcdf-c#1962). ## 4.8.0 - March 30, 2021 * [Enhancement] Bump the NC_DISPATCH_VERSION from 2 to 3, and as a side effect, unify the definition of NC_DISPATCH_VERSION so it only needs to be defined in CMakeLists.txt and configure.ac. See [Github #1945](Unidata/netcdf-c#1945) for more information. * [Enhancement] Provide better cross platform path name management. This converts paths for various platforms (e.g. Windows, MSYS, etc.) so that they are in the proper format for the executing platform. See [Github #1958](Unidata/netcdf-c#1958) for more information. * [Bug Fixes] The nccopy program was treating -d0 as turning deflation on rather than interpreting it as "turn off deflation". See [Github #1944](Unidata/netcdf-c#1944) for more information. * [Enhancement] Add support for storing NCZarr data in zip files. See [Github #1942](Unidata/netcdf-c#1942) for more information. * [Bug Fixes] Make fillmismatch the default for DAP2 and DAP4; too many servers ignore this requirement. * [Bug Fixes] Fix some memory leaks in NCZarr, fix a bug with long strides in NCZarr. See [Github #1913](Unidata/netcdf-c#1913) for more information. * [Enhancement] Add some optimizations to NCZarr, dosome cleanup of code cruft, add some NCZarr test cases, add a performance test to NCZarr. See [Github #1908](Unidata/netcdf-c#1908) for more information. * [Bug Fix] Implement a better chunk cache system for NCZarr. The cache now uses extendible hashing plus a linked list for provide a combination of expandibility, fast access, and LRU behavior. See [Github #1887](Unidata/netcdf-c#1887) for more information. * [Enhancement] Provide .rc fields for S3 authentication: HTTP.S3.ACCESSID and HTTP.S3.SECRETKEY. * [Enhancement] Give the client control over what parts of a DAP2 URL are URL encoded (i.e. %xx). This is to support the different decoding rules that servers apply to incoming URLS. See [Github #1884](Unidata/netcdf-c#1884) for more information. * [Bug Fix] Fix incorrect time offsets from `ncdump -t`, in some cases when the time `units` attribute contains both a **non-zero** time-of-day, and a time zone suffix containing the letter "T", such as "UTC". See [Github #1866](Unidata/netcdf-c#1866) for more information. * [Bug Fix] Cleanup the NCZarr S3 build options. See [Github #1869](Unidata/netcdf-c#1869) for more information. * [Bug Fix] Support aligned access for selected ARM processors. See [Github #1871](Unidata/netcdf-c#1871) for more information. * [Documentation] Migrated the documents in the NUG/ directory to the dedicated NUG repository found at https://github.com/Unidata/netcdf * [Bug Fix] Revert the internal filter code to simplify it. From the user's point of view, the only visible change should be that (1) the functions that convert text to filter specs have had their signature reverted and renamed and have been moved to netcdf_aux.h, and (2) Some filter API functions now return NC_ENOFILTER when inquiry is made about some filter. Internally, the dispatch table has been modified to get rid of the complex structures. * [Bug Fix] If the HDF5 byte-range Virtual File Driver is available )HDf5 1.10.6 or later) then use it because it has better performance than the one currently built into the netcdf library. * [Bug Fix] Fixed byte-range support with cURL > 7.69. See [Unidata/netcdf-c#1798]. * [Enhancement] Added new test for using compression with parallel I/O: nc_test4/tst_h_par_compress.c. See [Unidata/netcdf-c#1784]. * [Bug Fix] Don't return error for extra calls to nc_redef() for netCDF/HDF5 files, unless classic model is in use. See [Unidata/netcdf-c#1779]. * [Enhancement] Added new parallel I/O benchmark program to mimic NOAA UFS data writes, built when --enable-benchmarks is in configure. See [Unidata/netcdf-c#1777]. * [Bug Fix] Now allow szip to be used on variables with unlimited dimension [Unidata/netcdf-c#1774]. * [Enhancement] Add support for cloud storage using a variant of the Zarr storage format. Warning: this feature is highly experimental and is subject to rapid evolution [https://www.unidata.ucar.edu/blogs/developer/en/entry/overview-of-zarr-support-in]. * [Bug Fix] Fix nccopy to properly set default chunking parameters when not otherwise specified. This can significantly improve performance in selected cases. Note that if seeing slow performance with nccopy, then, as a work-around, specifically set the chunking parameters. [Unidata/netcdf-c#1763]. * [Bug Fix] Fix some protocol bugs/differences between the netcdf-c library and the OPeNDAP Hyrax server. Also cleanup checksum handling [https://github.com/Unidata/netcdf-c/issues/1712].* [Bug Fix] IMPORTANT: Ncgen was not properly handling large data sections. The problem manifests as incorrect ordering of data in the created file. Aside from examining the file with ncdump, the error can be detected by running ncgen with the -lc flag (to produce a C file). Examine the file to see if any variable is written in pieces as opposed to a single call to nc_put_vara. If multiple calls to nc_put_vara are used to write a variable, then it is probable that the data order is incorrect. Such multiple writes can occur for large variables and especially when one of the dimensions is unlimited. * [Bug Fix] Add necessary __declspec declarations to allow compilation of netcdf library without causing errors or (_declspec related) warnings [Unidata/netcdf-c#1725]. * [Enhancement] When a filter is applied twice with different parameters, then the second set is used for writing the dataset [Unidata/netcdf-c#1713]. * [Bug Fix] Now larger cache settings are used for sequential HDF5 file creates/opens on parallel I/O capable builds; see [Github #1716](Unidata/netcdf-c#1716) for more information. * [Bug Fix] Add functions to libdispatch/dnotnc4.c to support dispatch table operations that should work for any dispatch table, even if they do not do anything; functions such as nc_inq_var_filter [Unidata/netcdf-c#1693]. * [Bug Fix] Fixed a scalar annotation error when scalar == 0; see [Github #1707](Unidata/netcdf-c#1707) for more information. * [Bug Fix] Use proper CURLOPT values for VERIFYHOST and VERIFYPEER; the semantics for VERIFYHOST in particular changed. Documented in NUG/DAP2.md. See [Unidata/netcdf-c#1684]. * [Bug Fix][cmake] Correct an issue with parallel filter test logic in CMake-based builds. * [Bug Fix] Now allow nc_inq_var_deflate()/nc_inq_var_szip() to be called for all formats, not just HDF5. Non-HDF5 files return NC_NOERR and report no compression in use. This reverts behavior that was changed in the 4.7.4 release. See [Unidata/netcdf-c#1691]. * [Bug Fix] Compiling on a big-endian machine exposes some missing forward delcarations in dfilter.c. * [File Change] Change from HDF5 v1.6 format compatibility, back to v1.8 compatibility, for newly created files. The superblock changes from version 0 back to version 2. An exception is when using libhdf5 deprecated versions 1.10.0 and 1.10.1, which can only create v1.6 compatible format. Full backward read/write compatibility for netCDF-4 is maintained in all cases. See [Github #951](Unidata/netcdf-c#951). ## 4.7.4 - March 27, 2020 * [Windows] Bumped packaged HDF5 to 1.10.6, HDF4 to 4.2.14, and libcurl to 7.60.0. * [Enhancement] Support has been added for HDF5-1.12.0. See [Unidata/netcdf-c#1528]. * [Bug Fix] Correct behavior for the command line utilities when directly accessing a directory using utf8 characters. See [Github #1669] (Unidata/netcdf-c#1669), [Github #1668] (Unidata/netcdf-c#1668) and [Github #1666] (Unidata/netcdf-c#1666) for more information. * [Bug Fix] Attempts to set filters or chunked storage on scalar vars will now return NC_EINVAL. Scalar vars cannot be chunked, and only chunked vars can have filters. Previously the library ignored these attempts, and always storing scalars as contiguous storage. See [Unidata/netcdf-c#1644]. * [Enhancement] Support has been added for multiple filters per variable. See [Unidata/netcdf-c#1584]. * [Enhancement] Now nc_inq_var_szip retuns 0 for parameter values if szip is not in use for var. See [Unidata/netcdf-c#1618]. * [Enhancement] Now allow parallel I/O with filters, for HDF5-1.10.3 and later. See [Unidata/netcdf-c#1473]. * [Enhancement] Increased default size of cache buffer to 16 MB, from 4 MB. Increased number of slots to 4133. See [Unidata/netcdf-c#1541]. * [Enhancement] Allow zlib compression to be used with parallel I/O writes, if HDF5 version is 1.10.3 or greater. See [Unidata/netcdf-c#1580]. * [Enhancement] Restore use of szip compression when writing data (including writing in parallel if HDF5 version is 1.10.3 or greater). See [Unidata/netcdf-c#1546]. * [Enhancement] Enable use of compact storage option for small vars in netCDF/HDF5 files. See [Unidata/netcdf-c#1570]. * [Enhancement] Updated benchmarking program bm_file.c to better handle very large files. See [Unidata/netcdf-c#1555]. * [Enhancement] Added version number to dispatch table, and now check version with nc_def_user_format(). See [Unidata/netcdf-c#1599]. * [Bug Fix] Fixed user setting of MPI launcher for parallel I/O HDF5 test in h5_test. See [Unidata/netcdf-c#1626]. * [Bug Fix] Fixed problem of growing memory when netCDF-4 files were opened and closed. See [Unidata/netcdf-c#1575 and Unidata/netcdf-c#1571]. * [Enhancement] Increased size of maximum allowed name in HDF4 files to NC_MAX_NAME. See [Unidata/netcdf-c#1631]. ## 4.7.3 - November 20, 2019 * [Bug Fix]Fixed an issue where installs from tarballs will not properly compile in parallel environments. * [Bug Fix] Library was modified so that rewriting the same attribute happens without deleting the attribute, to avoid a limit on how many times this may be done in HDF5. This fix was thought to be in 4.6.2 but was not. See [Unidata/netcdf-c#350]. * [Enhancement] Add a dispatch version number to netcdf_meta.h and libnetcdf.settings, in case we decide to change dispatch table in future. See [Unidata/netcdf-c#1469]. * [Bug Fix] Now testing that endianness can only be set on atomic ints and floats. See [Unidata/netcdf-c#1479]. * [Bug Fix] Fix for subtle error involving var and unlimited dim of the same name, but unrelated, in netCDF-4. See [Unidata/netcdf-c#1496]. * [Enhancement] Update for attribute documentation. See [Unidata/netcdf-c#1512]. * [Bug Fix][Enhancement] Corrected assignment of anonymous (a.k.a. phony) dimensions in an HDF5 file. Now when a dataset uses multiple dimensions of the same size, netcdf assumes they are different dimensions. See [GitHub #1484](Unidata/netcdf-c#1484) for more information. ## 4.7.2 - October 22, 2019 * [Bug Fix][Enhancement] Various bug fixes and enhancements. * [Bug Fix][Enhancement] Corrected an issue where protected memory was being written to with some pointer slight-of-hand. This has been in the code for a while, but appears to be caught by the compiler on OSX, under circumstances yet to be completely nailed down. See [GitHub #1486] (Unidata/netcdf-c#1486) for more information. * [Enhancement] [Parallel IO] Added support for parallel functions in MSVC. See [Github #1492](Unidata/netcdf-c#1492) for more information. * [Enhancement] Added a function for changing the ncid of an open file. This function should only be used if you know what you are doing, and is meant to be used primarily with PIO integration. See [GitHub #1483] (Unidata/netcdf-c#1483) and [GitHub #1487] (Unidata/netcdf-c#1487) for more information. ## 4.7.1 - August 27, 2019 * [Enhancement] Added unit_test directory, which contains unit tests for the libdispatch and libsrc4 code (and any other directories that want to put unit tests there). Use --disable-unit-tests to run without unit tests (ex. for code coverage analysis). See [GitHub #1458] (Unidata/netcdf-c#1458). * [Bug Fix] Remove obsolete _CRAYMPP and LOCKNUMREC macros from code. Also brought documentation up to date in man page. These macros were used in ancient times, before modern parallel I/O systems were developed. Programmers interested in parallel I/O should see nc_open_par() and nc_create_par(). See [GitHub #1459](Unidata/netcdf-c#1459). * [Enhancement] Remove obsolete and deprecated functions nc_set_base_pe() and nc_inq_base_pe() from the dispatch table. (Both functions are still supported in the library, this is an internal change only.) See [GitHub #1468](Unidata/netcdf-c#1468). * [Bug Fix] Reverted nccopy behavior so that if no -c parameters are given, then any default chunking is left to the netcdf-c library to decide. See [GitHub #1436](Unidata/netcdf-c#1436). ## 4.7.0 - April 29, 2019 * [Enhancement] Updated behavior of `pkgconfig` and `nc-config` to allow the use of the `--static` flags, e.g. `nc-config --libs --static`, which will show information for linking against `libnetcdf` statically. See [Github #1360] (Unidata/netcdf-c#1360) and [Github #1257] (Unidata/netcdf-c#1257) for more information. * [Enhancement] Provide byte-range reading of remote datasets. This allows read-only access to, for example, Amazon S3 objects and also Thredds Server datasets via the HTTPService access method. See [GitHub #1251] (Unidata/netcdf-c#1251). * Update the license from the home-brewed NetCDF license to the standard 3-Clause BSD License. This change does not result in any new restrictions; it is merely the adoption of a standard, well-known and well-understood license in place of the historic NetCDF license written at Unidata. This is part of a broader push by Unidata to adopt modern, standardized licensing. ## 4.6.3 - February 28, 2019 * [Bug Fix] Correctly generated `netcdf.pc` generated either by `configure` or `cmake`. If linking against a static netcdf, you would need to pass the `--static` argument to `pkg-config` in order to list all of the downstream dependencies. See [Github #1324](Unidata/netcdf-c#1324) for more information. * Now always write hidden coordinates attribute, which allows faster file opens when present. See [Github #1262](Unidata/netcdf-c#1262) for more information. * Some fixes for rename, including fix for renumbering of varids after a rename (#1307), renaming var to dim without coordinate var. See [Github #1297] (Unidata/netcdf-c#1297). * Fix of NULL parameter causing segfaults in put_vars functions. See [Github #1265] (Unidata/netcdf-c#1265) for more information. * Fix of --enable-benchmark benchmark tests [Github #1211] (Unidata/netcdf-c#1211) * Update the license from the home-brewed NetCDF license to the standard 3-Clause BSD License. This change does not result in any new restrictions; it is merely the adoption of a standard, well-known and well-understood license in place of the historic NetCDF license written at Unidata. This is part of a broader push by Unidata to adopt modern, standardized licensing. * [BugFix] Corrected DAP-related issues on big-endian machines. See [Github #1321] (Unidata/netcdf-c#1321), [Github #1302] (Unidata/netcdf-c#1302) for more information. * [BugFix][Enhancement] Various and sundry bugfixes and performance enhancements, thanks to \@edhartnett, \@gsjarrdema, \@t-b, \@wkliao, and all of our other contributors. * [Enhancement] Extended `nccopy -F` syntax to support multiple variables with a single invocation. See [Github #1311](Unidata/netcdf-c#1311) for more information. * [BugFix] Corrected an issue where DAP2 was incorrectly converting signed bytes, resulting in an erroneous error message under some circumstances. See [GitHub #1317] (Unidata/netcdf-c#1317) for more information. See [Github #1319] (Unidata/netcdf-c#1319) for related information. * [BugFix][Enhancement] Modified `nccopy` so that `_NCProperties` is not copied over verbatim but is instead generated based on the version of `libnetcdf` used when copying the file. Additionally, `_NCProperties` are displayed if/when associated with a netcdf3 file, now. See [GitHub#803] (Unidata/netcdf-c#803) for more information.

DennisHeimbigner requested a review from WardF as a code owner February 13, 2019 21:38

DennisHeimbigner mentioned this pull request Feb 13, 2019

Improve OPeNDAP error message #1316

Closed

WardF merged commit 29d2643 into master Feb 13, 2019

WardF deleted the fillhack.dmh branch February 13, 2019 23:07

WardF self-assigned this Mar 20, 2020

WardF added this to the 4.7.4 milestone Mar 20, 2020

d70-t mentioned this pull request Feb 24, 2021

Handling of signed bytes from OPeNDAP via pydap pydata/xarray#4954

Closed

d70-t mentioned this pull request Mar 12, 2021

conventions: decode unsigned integers to signed if _Unsigned=false pydata/xarray#4966

Merged

4 tasks

tmieslinger mentioned this pull request Apr 6, 2021

HALO cloud mask files: engine=netcdf eurec4a/eurec4a-intake#61

Merged

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Add hack to deal with DAP2 signed byte conversion. #1317

Add hack to deal with DAP2 signed byte conversion. #1317

DennisHeimbigner commented Feb 13, 2019

ChrisBarker-NOAA commented Feb 11, 2020

WardF commented Feb 11, 2020

ChrisBarker-NOAA commented Feb 11, 2020 •

edited

Loading

WardF commented Feb 11, 2020

ChrisBarker-NOAA commented Feb 11, 2020

DennisHeimbigner commented Feb 11, 2020

DennisHeimbigner commented Feb 11, 2020

lesserwhirls commented Feb 12, 2020

ChrisBarker-NOAA commented Feb 12, 2020

lesserwhirls commented Feb 12, 2020

DennisHeimbigner commented Feb 12, 2020

ChrisBarker-NOAA commented Feb 13, 2020

dopplershift commented Feb 14, 2020

rsignell-usgs commented Feb 25, 2020 •

edited

Loading

DennisHeimbigner commented Feb 25, 2020

DennisHeimbigner commented Feb 25, 2020

ChrisBarker-NOAA commented Feb 27, 2020

dopplershift commented Feb 27, 2020

rsignell-usgs commented Feb 27, 2020 •

edited

Loading

Add hack to deal with DAP2 signed byte conversion. #1317

Add hack to deal with DAP2 signed byte conversion. #1317

Conversation

DennisHeimbigner commented Feb 13, 2019

ChrisBarker-NOAA commented Feb 11, 2020

WardF commented Feb 11, 2020

ChrisBarker-NOAA commented Feb 11, 2020 • edited Loading

WardF commented Feb 11, 2020

ChrisBarker-NOAA commented Feb 11, 2020

DennisHeimbigner commented Feb 11, 2020

DennisHeimbigner commented Feb 11, 2020

lesserwhirls commented Feb 12, 2020

ChrisBarker-NOAA commented Feb 12, 2020

lesserwhirls commented Feb 12, 2020

DennisHeimbigner commented Feb 12, 2020

ChrisBarker-NOAA commented Feb 13, 2020

dopplershift commented Feb 14, 2020

rsignell-usgs commented Feb 25, 2020 • edited Loading

DennisHeimbigner commented Feb 25, 2020

DennisHeimbigner commented Feb 25, 2020

ChrisBarker-NOAA commented Feb 27, 2020

dopplershift commented Feb 27, 2020

rsignell-usgs commented Feb 27, 2020 • edited Loading

ChrisBarker-NOAA commented Feb 11, 2020 •

edited

Loading

rsignell-usgs commented Feb 25, 2020 •

edited

Loading

rsignell-usgs commented Feb 27, 2020 •

edited

Loading